The 2.0 version of rSNPBase

Variant report

Variant rs4803786
Chromosome Location chr19:38612627-38612628
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:38551200-38613800 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr19:38587200-38613600 Strong transcription Cortex derived primary cultured neurospheres brain
3 chr19:38587400-38613400 Strong transcription Duodenum Mucosa Duodenum
4 chr19:38591800-38642800 Weak transcription Small Intestine intestine
5 chr19:38596000-38613800 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr19:38600600-38652800 Weak transcription NHDF-Ad bronchial
7 chr19:38602800-38612800 Weak transcription Hela-S3 cervix
8 chr19:38603000-38625400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr19:38604000-38613400 Strong transcription Primary B cells from cord blood blood
10 chr19:38605800-38625400 Weak transcription HMEC breast
11 chr19:38606000-38613000 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr19:38606200-38612800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr19:38606200-38613800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr19:38607200-38613800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr19:38607600-38613200 Strong transcription Rectal Mucosa Donor 29 rectum
16 chr19:38607600-38613400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr19:38607600-38613800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr19:38607600-38613800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
19 chr19:38607800-38613800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr19:38608400-38613800 Strong transcription Liver Liver
21 chr19:38608800-38613600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr19:38608800-38614000 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr19:38608800-38614000 ZNF genes & repeats Fetal Intestine Small intestine
24 chr19:38609400-38613000 Strong transcription Brain Germinal Matrix brain
25 chr19:38609400-38613800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr19:38609600-38613800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr19:38609800-38613400 Strong transcription Primary T helper naive cells fromperipheralblood blood
28 chr19:38610000-38613400 Strong transcription H1 Cell Line embryonic stem cell
29 chr19:38610000-38613400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr19:38610000-38613800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
31 chr19:38610400-38613000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
32 chr19:38610400-38613000 Weak transcription Colonic Mucosa Colon
33 chr19:38610600-38613000 Weak transcription Pancreas Pancrea
34 chr19:38610600-38613200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr19:38610600-38613400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr19:38610600-38613800 Strong transcription Ovary ovary
37 chr19:38610800-38643600 Weak transcription HepG2 liver
38 chr19:38611000-38612800 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr19:38611000-38613000 Weak transcription Spleen Spleen
40 chr19:38611000-38613000 Weak transcription NHLF lung
41 chr19:38611000-38652800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr19:38611200-38612800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr19:38611200-38625400 Weak transcription NHEK skin
44 chr19:38611400-38613000 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr19:38611400-38613000 Weak transcription K562 blood
46 chr19:38611600-38612800 Weak transcription iPS-20b Cell Line embryonic stem cell
47 chr19:38611600-38612800 Weak transcription Fetal Brain Male brain
48 chr19:38611600-38612800 Weak transcription Rectal Smooth Muscle rectum
49 chr19:38611600-38613000 Weak transcription Muscle Satellite Cultured Cells --
50 chr19:38611600-38613000 Weak transcription Brain Angular Gyrus brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015