The 2.0 version of rSNPBase

Variant report

Variant rs4803800
Chromosome Location chr19:38626019-38626020
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:38591800-38642800 Weak transcription Small Intestine intestine
2 chr19:38600600-38652800 Weak transcription NHDF-Ad bronchial
3 chr19:38610800-38643600 Weak transcription HepG2 liver
4 chr19:38611000-38652800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr19:38611600-38634400 Weak transcription Stomach Mucosa stomach
6 chr19:38611600-38634800 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr19:38611600-38634800 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr19:38611600-38641400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr19:38611600-38653000 Weak transcription HUVEC blood vessel
10 chr19:38611800-38634600 Weak transcription NH-A brain
11 chr19:38611800-38642600 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr19:38611800-38653000 Weak transcription Fetal Kidney kidney
13 chr19:38613400-38633600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr19:38613400-38634400 Weak transcription Primary T helper cells fromperipheralblood blood
15 chr19:38613600-38634800 Weak transcription Primary T cells fromperipheralblood blood
16 chr19:38613800-38629800 Weak transcription Liver Liver
17 chr19:38613800-38630000 Weak transcription Brain Hippocampus Middle brain
18 chr19:38613800-38633000 Weak transcription Brain Angular Gyrus brain
19 chr19:38613800-38633000 Weak transcription Brain Substantia Nigra brain
20 chr19:38613800-38633400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr19:38613800-38635600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr19:38613800-38636600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
23 chr19:38613800-38639000 Weak transcription Left Ventricle heart
24 chr19:38613800-38641800 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr19:38613800-38643200 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr19:38613800-38652200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr19:38613800-38652600 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr19:38614000-38630200 Weak transcription Brain Inferior Temporal Lobe brain
29 chr19:38614000-38634800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr19:38616000-38652600 Strong transcription Primary B cells from peripheral blood blood
31 chr19:38616200-38641600 Weak transcription H9 Cell Line embryonic stem cell
32 chr19:38616600-38642000 Weak transcription Dnd41 blood
33 chr19:38617000-38652000 Strong transcription Fetal Intestine Small intestine
34 chr19:38617800-38626400 Strong transcription Osteobl bone
35 chr19:38618200-38651000 Strong transcription Fetal Intestine Large intestine
36 chr19:38618400-38626600 Strong transcription Cortex derived primary cultured neurospheres brain
37 chr19:38619000-38626600 Strong transcription Rectal Mucosa Donor 31 rectum
38 chr19:38619000-38630800 Strong transcription Primary hematopoietic stem cells short term culture blood
39 chr19:38619600-38647800 Strong transcription Fetal Stomach stomach
40 chr19:38620600-38626800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr19:38620800-38626200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
42 chr19:38620800-38626800 Strong transcription Rectal Mucosa Donor 29 rectum
43 chr19:38620800-38632600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr19:38621000-38627000 Strong transcription Duodenum Mucosa Duodenum
45 chr19:38621000-38633800 Weak transcription Primary monocytes fromperipheralblood blood
46 chr19:38621400-38629000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
47 chr19:38621600-38630400 Weak transcription Ovary ovary
48 chr19:38621600-38642800 Weak transcription NHLF lung
49 chr19:38621800-38634000 Weak transcription Thymus Thymus
50 chr19:38622000-38634600 Weak transcription Brain Germinal Matrix brain

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Last update: Aug 31, 2015