Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs12553375	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12554826	0.82[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs12555280	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.85[ASN][1000 genomes]
rs1410372	0.82[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs17556165	0.85[ASN][1000 genomes]
rs41315641	0.82[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs55660258	0.90[ASN][1000 genomes]
rs55799488	0.90[ASN][1000 genomes]
rs55905211	0.90[ASN][1000 genomes]
rs56230910	0.85[ASN][1000 genomes]
rs56887849	0.90[ASN][1000 genomes]
rs57091242	0.88[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs57391768	0.82[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs57760439	0.90[ASN][1000 genomes]
rs57886757	0.90[ASN][1000 genomes]
rs60455022	0.82[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs7022747	0.82[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs73647172	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7868854	0.90[ASN][1000 genomes]
rs7870595	0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1803911	chr9:73461480-73466355	Strong transcription Weak transcription ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
2	esv1813440	chr9:73461480-73466355	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:73427600-73483400	Weak transcription	Aorta	Aorta
2	chr9:73448200-73473600	Weak transcription	Fetal Kidney	kidney
3	chr9:73448400-73469000	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr9:73450600-73477600	Weak transcription	Ovary	ovary
5	chr9:73452000-73469600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
6	chr9:73455600-73480600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr9:73457200-73485200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr9:73457800-73480600	Weak transcription	Cortex derived primary cultured neurospheres	brain
9	chr9:73461400-73482000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr9:73463600-73471000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr9:73463600-73472800	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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