Variant report

Variant	rs73691292
Chromosome Location	chr8:67012958-67012959
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10216874	1.00[AMR][1000 genomes]
rs73691284	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73691286	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73691302	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73693914	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	esv3414665	chr8:66936816-67381935	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:67004800-67015600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr8:67011600-67013800	Enhancers	Skeletal Muscle Female	skeletal muscle
3	chr8:67011800-67014200	Enhancers	Skeletal Muscle Male	skeletal muscle
4	chr8:67012600-67014000	Weak transcription	Psoas Muscle	Psoas
5	chr8:67012800-67014800	Enhancers	Fetal Heart	heart

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links