Variant report

Variant	rs73694762
Chromosome Location	chr7:38835662-38835663
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs73694709	1.00[AMR][1000 genomes]
rs73695824	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1032637	chr7:38832627-38902723	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv887966	chr7:38835035-38933942	Enhancers Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:109 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:38793400-38861200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr7:38800200-38837600	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr7:38803200-38845400	Weak transcription	Colonic Mucosa	Colon
4	chr7:38803200-38846000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
5	chr7:38804400-38836200	Weak transcription	Fetal Brain Male	brain
6	chr7:38813800-38836400	Weak transcription	HUVEC	blood vessel
7	chr7:38813800-38839600	Weak transcription	Right Ventricle	heart
8	chr7:38813800-38857400	Weak transcription	HSMM	muscle
9	chr7:38820000-38836600	Strong transcription	Monocytes-CD14+_RO01746	blood
10	chr7:38822200-38837400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
11	chr7:38822400-38836400	Weak transcription	HUES48 Cell Line	embryonic stem cell
12	chr7:38822400-38855200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr7:38824800-38836400	Strong transcription	Primary B cells from cord blood	blood
14	chr7:38825000-38837800	Weak transcription	Fetal Heart	heart
15	chr7:38825200-38836400	Strong transcription	Primary B cells from peripheral blood	blood
16	chr7:38825600-38835800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr7:38825600-38835800	Strong transcription	GM12878-XiMat	blood
18	chr7:38825800-38836000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
19	chr7:38826200-38836400	Strong transcription	Primary T helper cells fromperipheralblood	blood
20	chr7:38827000-38836200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr7:38827200-38836400	Strong transcription	Rectal Mucosa Donor 29	rectum
22	chr7:38827400-38836400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
23	chr7:38827600-38835800	Strong transcription	Primary T cells fromperipheralblood	blood
24	chr7:38828200-38836200	Strong transcription	Primary neutrophils fromperipheralblood	blood
25	chr7:38828600-38836400	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
26	chr7:38829200-38837200	Weak transcription	Skeletal Muscle Female	skeletal muscle
27	chr7:38829400-38836000	Weak transcription	Fetal Brain Female	brain
28	chr7:38829400-38836200	Weak transcription	Fetal Kidney	kidney
29	chr7:38829400-38836200	Weak transcription	Pancreatic Islets	Pancreatic Islet
30	chr7:38829400-38836400	Weak transcription	Brain Hippocampus Middle	brain
31	chr7:38829400-38837200	Weak transcription	Small Intestine	intestine
32	chr7:38829400-38837400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
33	chr7:38829400-38837600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
34	chr7:38829400-38837600	Weak transcription	H1 Cell Line	embryonic stem cell
35	chr7:38829400-38838200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
36	chr7:38829400-38839000	Weak transcription	Gastric	stomach
37	chr7:38829400-38841600	Weak transcription	Osteobl	bone
38	chr7:38829400-38846600	Weak transcription	Brain Anterior Caudate	brain
39	chr7:38829400-38846600	Weak transcription	Brain Substantia Nigra	brain
40	chr7:38829400-38846800	Weak transcription	Brain Cingulate Gyrus	brain
41	chr7:38829400-38854600	Weak transcription	Left Ventricle	heart
42	chr7:38829400-38855200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
43	chr7:38829400-38855600	Weak transcription	Skeletal Muscle Male	skeletal muscle
44	chr7:38829400-38856400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
45	chr7:38829400-38864400	Weak transcription	Thymus	Thymus
46	chr7:38829400-38864600	Weak transcription	NHLF	lung
47	chr7:38829600-38837400	Weak transcription	HepG2	liver
48	chr7:38829600-38838200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
49	chr7:38829800-38838200	Weak transcription	HUES6 Cell Line	embryonic stem cell
50	chr7:38830600-38836400	Strong transcription	Primary T cells from cord blood	blood

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