Variant report

Variant	nsv887966
Chromosome Location	chr7:38835035-38933942
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:819)
CpG islands
(count:183)
Chromatin interactive
region (count:48)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:819 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:38846592-38846782	K562	blood:	n/a	n/a
2	ARID3A	chr7:38903201-38903829	HepG2	liver:	n/a	chr7:38903318-38903334
3	ARID3A	chr7:38895194-38895249	K562	blood:	n/a	n/a
4	ARID3A	chr7:38836541-38836865	HepG2	liver:	n/a	n/a
5	ARID3A	chr7:38836538-38836920	K562	blood:	n/a	n/a
6	ATF1	chr7:38895500-38895843	K562	blood:	n/a	n/a
7	ATF1	chr7:38885836-38886202	K562	blood:	n/a	n/a
8	ATF1	chr7:38846594-38847146	K562	blood:	n/a	n/a
9	ATF3	chr7:38885776-38886217	K562	blood:	n/a	n/a
10	ATF3	chr7:38846485-38846894	K562	blood:	n/a	n/a
11	BACH1	chr7:38921940-38922202	K562	blood:	n/a	n/a
12	BACH1	chr7:38862157-38862459	H1-hESC	embryonic stem cell:	n/a	n/a
13	BACH1	chr7:38862141-38862505	K562	blood:	n/a	n/a
14	BACH1	chr7:38921917-38922109	H1-hESC	embryonic stem cell:	n/a	n/a
15	BACH1	chr7:38923313-38923332	K562	blood:	n/a	n/a
16	BHLHE40	chr7:38903410-38903558	HepG2	liver:	n/a	n/a
17	BHLHE40	chr7:38898181-38898394	K562	blood:	n/a	n/a
18	BHLHE40	chr7:38836544-38836732	K562	blood:	n/a	n/a
19	CBX3	chr7:38903099-38903702	HCT-116	colon:	n/a	n/a
20	CCNT2	chr7:38846598-38846876	K562	blood:	n/a	n/a
21	CCNT2	chr7:38883382-38883631	K562	blood:	n/a	n/a
22	CEBPB	chr7:38911273-38911473	HepG2	liver:	n/a	n/a
23	CEBPB	chr7:38923354-38923682	HepG2	liver:	n/a	chr7:38923492-38923503 chr7:38923491-38923504 chr7:38923491-38923504 chr7:38923431-38923443
24	CEBPB	chr7:38885905-38886280	IMR90	lung:	n/a	n/a
25	CEBPB	chr7:38903549-38903898	IMR90	lung:	n/a	chr7:38903717-38903730 chr7:38903717-38903728
26	CEBPB	chr7:38903555-38903881	K562	blood:	n/a	chr7:38903717-38903730 chr7:38903717-38903728
27	CEBPB	chr7:38923362-38923664	K562	blood:	n/a	chr7:38923492-38923503 chr7:38923491-38923504 chr7:38923491-38923504 chr7:38923431-38923443
28	CEBPB	chr7:38923415-38923626	A549	lung:	n/a	chr7:38923492-38923503 chr7:38923491-38923504 chr7:38923491-38923504 chr7:38923431-38923443
29	CEBPB	chr7:38923367-38923669	IMR90	lung:	n/a	chr7:38923492-38923503 chr7:38923491-38923504 chr7:38923491-38923504 chr7:38923431-38923443
30	CEBPB	chr7:38880681-38881372	IMR90	lung:	n/a	n/a
31	CEBPB	chr7:38845906-38846035	K562	blood:	n/a	n/a
32	CEBPB	chr7:38903523-38903860	ECC-1	luminal epithelium:	n/a	chr7:38903717-38903730 chr7:38903717-38903728
33	CEBPB	chr7:38836611-38836888	H1-hESC	embryonic stem cell:	n/a	n/a
34	CEBPB	chr7:38881268-38881279	K562	blood:	n/a	n/a
35	CEBPB	chr7:38885952-38886170	K562	blood:	n/a	n/a
36	CEBPB	chr7:38903552-38903896	H1-hESC	embryonic stem cell:	n/a	chr7:38903717-38903730 chr7:38903717-38903728
37	CEBPB	chr7:38903563-38903883	A549	lung:	n/a	chr7:38903717-38903730 chr7:38903717-38903728
38	CEBPB	chr7:38903545-38903858	Hela-S3	cervix:	n/a	chr7:38903717-38903730 chr7:38903717-38903728
39	CEBPB	chr7:38930116-38930331	IMR90	lung:	n/a	n/a
40	CEBPB	chr7:38862343-38862692	K562	blood:	n/a	chr7:38862522-38862530
41	CEBPB	chr7:38930035-38930360	HepG2	liver:	n/a	n/a
42	CEBPB	chr7:38930060-38930273	A549	lung:	n/a	n/a
43	CEBPB	chr7:38903537-38903903	HepG2	liver:	n/a	chr7:38903717-38903730 chr7:38903717-38903728
44	CEBPD	chr7:38846528-38846938	K562	blood:	n/a	n/a
45	CHD1	chr7:38836735-38836935	H1-hESC	embryonic stem cell:	n/a	n/a
46	CTCF	chr7:38929680-38929830	HVMF	connective:	n/a	n/a
47	CTCF	chr7:38836540-38836690	HVMF	connective:	n/a	n/a
48	CTCF	chr7:38836540-38836690	GM12874	blood:	n/a	n/a
49	CTCF	chr7:38868420-38868570	AG04450	lung:	n/a	chr7:38868426-38868444 chr7:38868428-38868449
50	CTCF	chr7:38929560-38929710	GM12865	blood:	n/a	n/a

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:38903039-38903089	ECC-1	luminal epithelium:	n/a
2	chr7:38880852-38880902	H1-hESC	embryonic stem cell:	embryo
3	chr7:38880852-38880902	GM19239	blood:	n/a
4	chr7:38903039-38903089	MCF10A-Er-Src	breast:	n/a
5	chr7:38880852-38880902	SK-N-SH	brain:	n/a
6	chr7:38880852-38880902	T-47D	breast:	n/a
7	chr7:38880852-38880902	CMK	blood:	n/a
8	chr7:38886074-38886124	K562	blood:	n/a
9	chr7:38903039-38903089	HUVEC	blood vessel:	n/a
10	chr7:38903039-38903089	NB4	blood:	n/a
11	chr7:38880852-38880902	NHBE	bronchial:	n/a
12	chr7:38903039-38903089	AG09309	skin:	n/a
13	chr7:38880852-38880902	HRPEpiC	eye:	n/a
14	chr7:38903039-38903089	GM12891	blood:	n/a
15	chr7:38903039-38903089	HCF	heart:	n/a
16	chr7:38886074-38886124	NT2-D1	testis:	n/a
17	chr7:38880852-38880902	GM12891	blood:	n/a
18	chr7:38886074-38886124	MCF10A-Er-Src	breast:	n/a
19	chr7:38880852-38880902	HCM	heart:	n/a
20	chr7:38880852-38880902	AG04450	lung:	fetal
21	chr7:38886074-38886124	RPTEC	kidney:	n/a
22	chr7:38886074-38886124	GM06990	blood:	n/a
23	chr7:38880852-38880902	HRE	kidney:	n/a
24	chr7:38886074-38886124	CMK	blood:	n/a
25	chr7:38903039-38903089	GM19239	blood:	n/a
26	chr7:38903039-38903089	AoSMC	blood vessel:	n/a
27	chr7:38880852-38880902	MCF10A-Er-Src	breast:	n/a
28	chr7:38880852-38880902	HEEpiC	esophagus:	n/a
29	chr7:38880852-38880902	PANC-1	pancreas:	n/a
30	chr7:38886074-38886124	HRPEpiC	eye:	n/a
31	chr7:38886074-38886124	NHDF-neo	bronchial:	n/a
32	chr7:38886074-38886124	Jurkat	blood:	n/a
33	chr7:38880852-38880902	AoSMC	blood vessel:	n/a
34	chr7:38903039-38903089	MCF-7	breast:	n/a
35	chr7:38880852-38880902	Hela-S3	cervix:	n/a
36	chr7:38903039-38903089	PANC-1	pancreas:	n/a
37	chr7:38880852-38880902	A549	lung:	n/a
38	chr7:38880852-38880902	HL-60	blood:	n/a
39	chr7:38886074-38886124	ProgFib	skin:	n/a
40	chr7:38880852-38880902	SAEC	small airway:	n/a
41	chr7:38886074-38886124	NB4	blood:	n/a
42	chr7:38903039-38903089	NHBE	bronchial:	n/a
43	chr7:38886074-38886124	AG09309	skin:	n/a
44	chr7:38903039-38903089	HCPEpiC	choroid plexus:	n/a
45	chr7:38886074-38886124	SK-N-SH_RA	brain:	n/a
46	chr7:38886074-38886124	SAEC	small airway:	n/a
47	chr7:38880852-38880902	MCF-7	breast:	n/a
48	chr7:38880852-38880902	GM12892	blood:	n/a
49	chr7:38886074-38886124	PrEC	prostate:	n/a
50	chr7:38903039-38903089	AG10803	skin:	n/a

(count:48 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr7:38915745..38917788-chr7:38919334..38921629,2	K562	blood:
2	chr7:38900320..38904154-chr7:38910727..38914259,3	K562	blood:
3	chr7:38917217..38919932-chr7:38921727..38923559,2	K562	blood:
4	chr7:38887343..38889713-chr7:38889792..38892384,2	MCF-7	breast:
5	chr7:38873915..38876598-chr7:38884159..38886331,2	MCF-7	breast:
6	chr7:38836355..38837155-chr7:39503792..39504917,3	MCF-7	breast:
7	chr7:38910718..38912408-chr7:38917039..38918947,2	MCF-7	breast:
8	chr7:38917217..38919932-chr7:38921727..38923559,2	K562	blood:
9	chr7:38873668..38876068-chr7:38880511..38882054,2	K562	blood:
10	chr7:38875566..38877442-chr7:38880848..38883339,2	MCF-7	breast:
11	chr7:38882709..38885356-chr7:38890864..38893223,2	K562	blood:
12	chr7:38889563..38891670-chr7:38895298..38897406,2	K562	blood:
13	chr7:38932121..38934531-chr7:38942831..38944906,2	K562	blood:
14	chr7:38933211..38936030-chr7:38947333..38948872,2	MCF-7	breast:
15	chr7:38882709..38885356-chr7:38890864..38893223,2	K562	blood:
16	chr7:38902352..38905123-chr7:38929723..38931780,2	MCF-7	breast:
17	chr7:38915745..38917788-chr7:38919334..38921629,2	K562	blood:
18	chr7:38906776..38909465-chr7:38940924..38943623,2	K562	blood:
19	chr7:38875566..38877442-chr7:38880848..38883339,2	MCF-7	breast:
20	chr7:38910718..38912408-chr7:38917039..38918947,2	MCF-7	breast:
21	chr7:38836202..38837177-chr7:39504337..39505154,4	K562	blood:
22	chr7:38857572..38859924-chr7:38860336..38863164,2	MCF-7	breast:
23	chr7:38873915..38876598-chr7:38884159..38886331,2	MCF-7	breast:
24	chr7:38906917..38908871-chr7:38912756..38915741,2	MCF-7	breast:
25	chr7:38885810..38887445-chr7:38893961..38896931,2	MCF-7	breast:
26	chr7:38906917..38908871-chr7:38912756..38915741,2	MCF-7	breast:
27	chr7:38884593..38886823-chr7:38890906..38893182,2	MCF-7	breast:
28	chr7:38857572..38859924-chr7:38860336..38863164,2	MCF-7	breast:
29	chr7:38900726..38902861-chr7:38904557..38906481,2	MCF-7	breast:
30	chr7:38893039..38894682-chr7:38896335..38898447,2	K562	blood:
31	chr7:38887343..38889713-chr7:38889792..38892384,2	MCF-7	breast:
32	chr7:38929214..38932230-chr7:38932411..38935645,3	K562	blood:
33	chr7:38873668..38876068-chr7:38880511..38882054,2	K562	blood:
34	chr7:38893413..38896014-chr7:38948618..38950136,2	K562	blood:
35	chr7:38862474..38864666-chr7:38869704..38871637,2	K562	blood:
36	chr7:38929214..38932230-chr7:38932411..38935645,3	K562	blood:
37	chr7:38888643..38891197-chr7:38936286..38938382,2	MCF-7	breast:
38	chr7:38900320..38904154-chr7:38910727..38914259,3	K562	blood:
39	chr7:38880902..38883461-chr7:38886381..38888372,2	K562	blood:
40	chr7:38880902..38883461-chr7:38886381..38888372,2	K562	blood:
41	chr7:38884593..38886823-chr7:38890906..38893182,2	MCF-7	breast:
42	chr7:38913005..38915768-chr7:38916494..38919026,3	K562	blood:
43	chr7:38913005..38915768-chr7:38916494..38919026,3	K562	blood:
44	chr7:38902352..38905123-chr7:38929723..38931780,2	MCF-7	breast:
45	chr7:38893039..38894682-chr7:38896335..38898447,2	K562	blood:
46	chr7:38889563..38891670-chr7:38895298..38897406,2	K562	blood:
47	chr7:38885810..38887445-chr7:38893961..38896931,2	MCF-7	breast:
48	chr7:38900726..38902861-chr7:38904557..38906481,2	MCF-7	breast:

No data

Variant related genes	Relation type
VPS41	TF binding region
VPS41	CpG island
ENSG00000106536	chromatin interactions
ENSG00000006715	chromatin interactions

Extended variants
information (count: 3372 )
Associated
traits (count: 82 )

Variant overlapped rSNPs/rCNVs (count:3372 , 50 per page) page: 1 2 3 4 5 6 7 ... 68

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs11984145	chr7:38835035-38835036	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance disease
2	rs188944549	chr7:38835052-38835053	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
3	rs370682584	chr7:38835077-38835078	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
4	rs371042465	chr7:38835088-38835089	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
5	rs373621950	chr7:38835101-38835102	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
6	rs201085181	chr7:38835102-38835103	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs148373860	chr7:38835141-38835142	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
8	rs202230619	chr7:38835160-38835161	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
9	rs376225538	chr7:38835168-38835169	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
10	rs140469332	chr7:38835182-38835183	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
11	rs150389637	chr7:38835189-38835190	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
12	rs181550744	chr7:38835191-38835192	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
13	rs138229234	chr7:38835211-38835212	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
14	rs142833840	chr7:38835212-38835213	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
15	rs368323801	chr7:38835238-38835239	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
16	rs187098618	chr7:38835248-38835249	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
17	rs75754084	chr7:38835306-38835307	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
18	rs191178776	chr7:38835308-38835309	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
19	rs564059477	chr7:38835328-38835329	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
20	rs533022629	chr7:38835386-38835387	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
21	rs576887389	chr7:38835400-38835401	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
22	rs549599683	chr7:38835401-38835402	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
23	rs569810238	chr7:38835436-38835437	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
24	rs531757737	chr7:38835437-38835438	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
25	rs181396791	chr7:38835440-38835441	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
26	rs148867512	chr7:38835443-38835444	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
27	rs534188400	chr7:38835474-38835475	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
28	rs554180992	chr7:38835520-38835521	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
29	rs559094961	chr7:38835531-38835532	Weak transcription Strong transcription Enhancers Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
30	rs572683307	chr7:38835624-38835625	Weak transcription Strong transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs73694762	chr7:38835662-38835663	Weak transcription Strong transcription Flanking Active TSS Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs540124076	chr7:38835679-38835680	Weak transcription Strong transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs556826342	chr7:38835687-38835688	Weak transcription Strong transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs143555458	chr7:38835697-38835698	Weak transcription Strong transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs533787370	chr7:38835860-38835861	Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
36	rs542015902	chr7:38835909-38835910	Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
37	rs17171466	chr7:38835926-38835927	Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
38	rs139089783	chr7:38835967-38835968	Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
39	rs540638854	chr7:38835975-38835976	Weak transcription Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
40	rs563722122	chr7:38836012-38836013	Weak transcription Strong transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs533085366	chr7:38836020-38836021	Weak transcription Strong transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs552654862	chr7:38836047-38836048	Weak transcription Strong transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs543309231	chr7:38836048-38836049	Weak transcription Strong transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs559308206	chr7:38836109-38836110	Weak transcription Strong transcription Flanking Active TSS Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs563376887	chr7:38836212-38836213	Weak transcription Bivalent/Poised TSS Strong transcription Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs185755764	chr7:38836305-38836306	Weak transcription Bivalent/Poised TSS Strong transcription Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs372330166	chr7:38836332-38836333	Weak transcription Bivalent/Poised TSS Strong transcription Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs34020927	chr7:38836356-38836357	Weak transcription Bivalent/Poised TSS Strong transcription Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs377118436	chr7:38836386-38836387	Weak transcription Bivalent/Poised TSS Strong transcription Flanking Active TSS Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs138065751	chr7:38836414-38836415	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:82)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Biliary cancer	19435499	CNVD
Cancer	16751803	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Wilms tumour	21544195	CNVD
Glioblastoma multiforme	17387387	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	18923191	CNVD
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Basal cell lymphoma	17170743	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Lung cancer	18438408	CNVD
lymphocytic leukemia	21291569	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Cancer	21637783	CNVD
Squamous cell cancer	20885788	CNVD
Breast cancer	16397240	CNVD
Non-small cell lung cancer	21829676	CNVD
Glioblastoma multiforme	17002787	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Glioblastoma multiforme	18628472	CNVD
Cancer	21183584	CNVD
Breast cancer	21785460	CNVD
Follicular lymphoma	20505157	CNVD
Williams-beuren syndrome	22470819	CNVD
Renal cell carcinoma	18765545	CNVD
Breast cancer	21364760	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	21251322	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Multiple myeloma	16461302	CNVD
Glioblastoma multiforme	21750150	CNVD
Hepatocellular carcinoma	16750200	CNVD
Prostate cancer	18632612	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Acute myeloid leukemia	17237825	CNVD
Breast cancer	17899364	CNVD
Breast cancer	20409316	CNVD
Acute monocytic leukemia	16498392	CNVD
Myelofibrosis	22110671	CNVD
Colorectal cancer	21645411	CNVD
Colorectal cancer	19455253	CNVD
Glioblastoma multiforme	22286061	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Sezary syndrome	18413736	CNVD
Gastric cancer	24379144	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:1782 , 50 per page) page: 1 2 3 4 5 6 7 ... 36

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:38757200-38835400	Weak transcription	Psoas Muscle	Psoas
2	chr7:38793400-38861200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr7:38800200-38837600	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr7:38803200-38845400	Weak transcription	Colonic Mucosa	Colon
5	chr7:38803200-38846000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
6	chr7:38804400-38836200	Weak transcription	Fetal Brain Male	brain
7	chr7:38813800-38836400	Weak transcription	HUVEC	blood vessel
8	chr7:38813800-38839600	Weak transcription	Right Ventricle	heart
9	chr7:38813800-38857400	Weak transcription	HSMM	muscle
10	chr7:38820000-38836600	Strong transcription	Monocytes-CD14+_RO01746	blood
11	chr7:38822200-38837400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr7:38822400-38836400	Weak transcription	HUES48 Cell Line	embryonic stem cell
13	chr7:38822400-38855200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr7:38823600-38835400	Strong transcription	Primary monocytes fromperipheralblood	blood
15	chr7:38824800-38836400	Strong transcription	Primary B cells from cord blood	blood
16	chr7:38825000-38837800	Weak transcription	Fetal Heart	heart
17	chr7:38825200-38836400	Strong transcription	Primary B cells from peripheral blood	blood
18	chr7:38825600-38835800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr7:38825600-38835800	Strong transcription	GM12878-XiMat	blood
20	chr7:38825800-38835600	Strong transcription	Adipose Nuclei	Adipose
21	chr7:38825800-38836000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
22	chr7:38826200-38836400	Strong transcription	Primary T helper cells fromperipheralblood	blood
23	chr7:38827000-38836200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr7:38827200-38836400	Strong transcription	Rectal Mucosa Donor 29	rectum
25	chr7:38827400-38836400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
26	chr7:38827600-38835400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
27	chr7:38827600-38835800	Strong transcription	Primary T cells fromperipheralblood	blood
28	chr7:38828200-38836200	Strong transcription	Primary neutrophils fromperipheralblood	blood
29	chr7:38828400-38835400	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
30	chr7:38828600-38835400	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
31	chr7:38828600-38836400	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
32	chr7:38829200-38837200	Weak transcription	Skeletal Muscle Female	skeletal muscle
33	chr7:38829400-38835200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
34	chr7:38829400-38836000	Weak transcription	Fetal Brain Female	brain
35	chr7:38829400-38836200	Weak transcription	Fetal Kidney	kidney
36	chr7:38829400-38836200	Weak transcription	Pancreatic Islets	Pancreatic Islet
37	chr7:38829400-38836400	Weak transcription	Brain Hippocampus Middle	brain
38	chr7:38829400-38837200	Weak transcription	Small Intestine	intestine
39	chr7:38829400-38837400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
40	chr7:38829400-38837600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
41	chr7:38829400-38837600	Weak transcription	H1 Cell Line	embryonic stem cell
42	chr7:38829400-38838200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
43	chr7:38829400-38839000	Weak transcription	Gastric	stomach
44	chr7:38829400-38841600	Weak transcription	Osteobl	bone
45	chr7:38829400-38846600	Weak transcription	Brain Anterior Caudate	brain
46	chr7:38829400-38846600	Weak transcription	Brain Substantia Nigra	brain
47	chr7:38829400-38846800	Weak transcription	Brain Cingulate Gyrus	brain
48	chr7:38829400-38854600	Weak transcription	Left Ventricle	heart
49	chr7:38829400-38855200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
50	chr7:38829400-38855600	Weak transcription	Skeletal Muscle Male	skeletal muscle

The 2.0 version of rSNPBase

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