Variant report

Variant	rs73698632
Chromosome Location	chr8:107187896-107187897
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10099011	1.00[AMR][1000 genomes]
rs59137754	1.00[AMR][1000 genomes]
rs61282617	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73698623	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73698629	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73698667	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73700536	1.00[AMR][1000 genomes]
rs73700551	1.00[AMR][1000 genomes]
rs9987145	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1021369	chr8:106493317-107243322	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	nsv611840	chr8:106913294-107265915	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv891262	chr8:107076421-107209378	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:107183200-107193400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
2	chr8:107187200-107188000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr8:107187400-107188800	Enhancers	Primary hematopoietic stem cells short term culture	blood
4	chr8:107187600-107188000	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr8:107187600-107188200	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr8:107187800-107188200	Enhancers	ES-I3 Cell Line	embryonic stem cell
7	chr8:107187800-107188200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr8:107187800-107188200	Enhancers	HUES48 Cell Line	embryonic stem cell
9	chr8:107187800-107188200	Enhancers	Cortex derived primary cultured neurospheres	brain
10	chr8:107187800-107188400	Enhancers	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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