Variant report

Variant	rs73700311
Chromosome Location	chr7:66302899-66302900
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10236434	1.00[AMR][1000 genomes]
rs10244204	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10248036	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10250162	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10255498	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10266087	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10266166	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10279154	1.00[EUR][1000 genomes]
rs28415224	1.00[EUR][1000 genomes]
rs28436055	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28438866	1.00[EUR][1000 genomes]
rs28619031	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28649220	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28671466	1.00[EUR][1000 genomes]
rs58669678	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58739839	1.00[EUR][1000 genomes]
rs73700314	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73702140	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1026559	chr7:65617368-66370805	Weak transcription Enhancers Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	116 gene(s)	inside rSNPs	diseases
2	nsv888328	chr7:66173040-66327654	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
3	nsv888329	chr7:66234585-66376095	Strong transcription Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
4	esv3432664	chr7:66291892-66307249	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:66297600-66309000	Weak transcription	Right Atrium	heart
2	chr7:66302800-66303000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
3	chr7:66302800-66303000	Flanking Active TSS	Spleen	Spleen

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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