Variant report

Variant	rs73700653
Chromosome Location	chr8:110566488-110566489
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:110558096..110562827-chr8:110563736..110568570,7	K562	blood:
2	chr8:110550646..110556695-chr8:110561304..110567831,11	K562	blood:
3	chr8:110564777..110566734-chr8:110651673..110653484,2	MCF-7	breast:
4	chr8:110565620..110568770-chr8:110596207..110599107,3	MCF-7	breast:
5	chr8:110564903..110567137-chr8:110578081..110579864,2	MCF-7	breast:
6	chr8:110551898..110554008-chr8:110566174..110569158,3	MCF-7	breast:
7	chr8:110551988..110555719-chr8:110561035..110566674,6	K562	blood:
8	chr8:110566288..110568164-chr8:110571093..110573990,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000147654	Chromatin interaction
ENSG00000147642	Chromatin interaction

rs_ID	r²[population]
rs10103098	1.00[EUR][1000 genomes]
rs10105594	1.00[EUR][1000 genomes]
rs2168677	0.83[AMR][1000 genomes]
rs28585635	1.00[EUR][1000 genomes]
rs55786960	1.00[AMR][1000 genomes]
rs55881558	1.00[AMR][1000 genomes]
rs56162009	1.00[AMR][1000 genomes]
rs56224859	1.00[AMR][1000 genomes]
rs57909958	1.00[AMR][1000 genomes]
rs73314998	0.85[AMR][1000 genomes]
rs73700609	1.00[AMR][1000 genomes]
rs73700611	1.00[AMR][1000 genomes]
rs73700612	1.00[AMR][1000 genomes]
rs73700630	1.00[AMR][1000 genomes]
rs73700654	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73700890	0.83[AMR][1000 genomes]
rs73700891	0.83[AMR][1000 genomes]
rs73700892	0.83[AMR][1000 genomes]
rs73700893	0.83[AMR][1000 genomes]
rs73704012	0.83[AMR][1000 genomes]
rs73704013	0.83[AMR][1000 genomes]
rs73704019	0.83[AMR][1000 genomes]
rs73704020	0.83[AMR][1000 genomes]
rs73704024	1.00[AMR][1000 genomes]
rs73704035	1.00[AMR][1000 genomes]
rs73704042	1.00[AMR][1000 genomes]

Chromatin state (count:112 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:110553000-110569800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
2	chr8:110553000-110569800	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr8:110553000-110570000	Weak transcription	Lung	lung
4	chr8:110553000-110571800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr8:110553000-110587000	Weak transcription	Esophagus	oesophagus
6	chr8:110553400-110566600	Weak transcription	Fetal Intestine Large	intestine
7	chr8:110553400-110569800	Weak transcription	Osteobl	bone
8	chr8:110553800-110566800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr8:110553800-110566800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr8:110553800-110569600	Weak transcription	Fetal Kidney	kidney
11	chr8:110553800-110569800	Weak transcription	Brain Inferior Temporal Lobe	brain
12	chr8:110553800-110613000	Weak transcription	NHLF	lung
13	chr8:110554000-110566600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr8:110554000-110567000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
15	chr8:110554000-110567000	Weak transcription	NH-A	brain
16	chr8:110554000-110567800	Weak transcription	Fetal Thymus	thymus
17	chr8:110554000-110569400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr8:110554000-110569600	Weak transcription	Fetal Brain Female	brain
19	chr8:110554000-110569800	Weak transcription	Brain Cingulate Gyrus	brain
20	chr8:110554000-110569800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
21	chr8:110554000-110569800	Weak transcription	Fetal Brain Male	brain
22	chr8:110554000-110569800	Weak transcription	Left Ventricle	heart
23	chr8:110554000-110569800	Weak transcription	Sigmoid Colon	Sigmoid Colon
24	chr8:110554000-110569800	Weak transcription	Small Intestine	intestine
25	chr8:110554000-110569800	Weak transcription	Thymus	Thymus
26	chr8:110554000-110570000	Weak transcription	Fetal Stomach	stomach
27	chr8:110554000-110570000	Weak transcription	Right Ventricle	heart
28	chr8:110554000-110571400	Weak transcription	Fetal Intestine Small	intestine
29	chr8:110554000-110571400	Weak transcription	Pancreas	Pancrea
30	chr8:110554000-110583000	Weak transcription	HMEC	breast
31	chr8:110554000-110589200	Weak transcription	Psoas Muscle	Psoas
32	chr8:110554200-110566600	Weak transcription	HUES6 Cell Line	embryonic stem cell
33	chr8:110554200-110567200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
34	chr8:110554200-110569800	Weak transcription	Fetal Muscle Leg	muscle
35	chr8:110554200-110569800	Weak transcription	HSMMtube	muscle
36	chr8:110554200-110576000	Weak transcription	Brain Substantia Nigra	brain
37	chr8:110554400-110566800	Weak transcription	Brain Anterior Caudate	brain
38	chr8:110554600-110566800	Weak transcription	A549	lung
39	chr8:110554600-110569200	Weak transcription	Fetal Heart	heart
40	chr8:110554600-110569800	Weak transcription	Rectal Smooth Muscle	rectum
41	chr8:110555200-110568600	Weak transcription	HepG2	liver
42	chr8:110555200-110579200	Weak transcription	Brain Angular Gyrus	brain
43	chr8:110555600-110566800	Weak transcription	Skeletal Muscle Female	skeletal muscle
44	chr8:110556800-110567000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
45	chr8:110558600-110569400	Weak transcription	Primary neutrophils fromperipheralblood	blood
46	chr8:110558800-110566800	Weak transcription	Adipose Nuclei	Adipose
47	chr8:110558800-110587800	Weak transcription	Stomach Mucosa	stomach
48	chr8:110562000-110568000	Weak transcription	Hela-S3	cervix
49	chr8:110562000-110569200	Weak transcription	Cortex derived primary cultured neurospheres	brain
50	chr8:110562200-110569800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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