Variant report

Variant	rs73710937
Chromosome Location	chr8:130838761-130838762
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:130838375..130838938-chr8:130903507..130904182,2	MCF-7	breast:
2	chr8:130830092..130833014-chr8:130837793..130842091,3	K562	blood:
3	chr7:132179184..132180204-chr8:130838562..130839258,3	MCF-7	breast:
4	chr8:130838362..130839036-chr8:130903623..130904767,5	MCF-7	breast:
5	chr8:130760414..130761002-chr8:130838183..130839066,2	MCF-7	breast:
6	chr8:130838576..130840911-chr8:130898985..130901514,2	K562	blood:

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs16904154	1.00[AMR][1000 genomes]
rs16904155	1.00[AMR][1000 genomes]
rs55732450	0.83[AMR][1000 genomes]
rs59439273	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60814482	1.00[AMR][1000 genomes]
rs60828490	1.00[AMR][1000 genomes]
rs73406847	1.00[AMR][1000 genomes]
rs73406852	1.00[AMR][1000 genomes]
rs73406872	1.00[AMR][1000 genomes]
rs73406873	1.00[AMR][1000 genomes]
rs73406877	1.00[AMR][1000 genomes]
rs73710909	1.00[AMR][1000 genomes]
rs73710936	1.00[AMR][1000 genomes]
rs73710938	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73710953	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428524	chr8:130731660-130894467	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	nsv522535	chr8:130804293-130844400	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
3	nsv526686	chr8:130808973-130839132	Flanking Active TSS Active TSS Enhancers Weak transcription ZNF genes & repeats Strong transcription Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:49 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130832400-130838800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr8:130837400-130839000	Enhancers	K562	blood
3	chr8:130837600-130838800	Enhancers	Primary neutrophils fromperipheralblood	blood
4	chr8:130837600-130838800	Enhancers	Fetal Thymus	thymus
5	chr8:130837600-130838800	Enhancers	Hela-S3	cervix
6	chr8:130838200-130838800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr8:130838200-130839000	Enhancers	Primary T cells fromperipheralblood	blood
8	chr8:130838200-130839000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
9	chr8:130838200-130839400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr8:130838400-130838800	Enhancers	Primary B cells from peripheral blood	blood
11	chr8:130838400-130838800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
12	chr8:130838400-130838800	Enhancers	Primary T helper cells PMA-I stimulated	--
13	chr8:130838400-130838800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
14	chr8:130838400-130838800	Enhancers	Primary T helper cells fromperipheralblood	blood
15	chr8:130838400-130838800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
16	chr8:130838400-130838800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
17	chr8:130838400-130838800	Enhancers	Adipose Nuclei	Adipose
18	chr8:130838400-130838800	Active TSS	Brain Anterior Caudate	brain
19	chr8:130838400-130838800	Enhancers	Brain Inferior Temporal Lobe	brain
20	chr8:130838400-130838800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
21	chr8:130838400-130838800	Enhancers	Brain Substantia Nigra	brain
22	chr8:130838400-130838800	Flanking Active TSS	Duodenum Mucosa	Duodenum
23	chr8:130838400-130838800	Enhancers	Stomach Mucosa	stomach
24	chr8:130838400-130838800	Enhancers	A549	lung
25	chr8:130838400-130838800	Flanking Active TSS	HepG2	liver
26	chr8:130838400-130838800	Enhancers	HMEC	breast
27	chr8:130838400-130839000	Enhancers	ES-I3 Cell Line	embryonic stem cell
28	chr8:130838400-130839000	Enhancers	HUES6 Cell Line	embryonic stem cell
29	chr8:130838400-130839000	Enhancers	HUES64 Cell Line	embryonic stem cell
30	chr8:130838400-130839000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
31	chr8:130838400-130839000	Enhancers	Primary T killer memory cells from peripheral blood	blood
32	chr8:130838400-130839000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
33	chr8:130838400-130839000	Enhancers	Fetal Intestine Small	intestine
34	chr8:130838400-130839000	Enhancers	Fetal Muscle Leg	muscle
35	chr8:130838400-130839000	Enhancers	Spleen	Spleen
36	chr8:130838400-130839000	Enhancers	Dnd41	blood
37	chr8:130838400-130839000	Enhancers	NHDF-Ad	bronchial
38	chr8:130838400-130839200	Enhancers	H1 Cell Line	embryonic stem cell
39	chr8:130838400-130839200	Enhancers	Primary T helper naive cells fromperipheralblood	blood
40	chr8:130838400-130839200	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
41	chr8:130838400-130839200	Enhancers	Right Ventricle	heart
42	chr8:130838400-130839400	Enhancers	Fetal Intestine Large	intestine
43	chr8:130838600-130838800	Enhancers	iPS-15b Cell Line	embryonic stem cell
44	chr8:130838600-130838800	Active TSS	Stomach Smooth Muscle	stomach
45	chr8:130838600-130839000	Enhancers	Skeletal Muscle Male	skeletal muscle
46	chr8:130838600-130839000	Flanking Active TSS	NHEK	skin
47	chr8:130838600-130842600	Weak transcription	Right Atrium	heart
48	chr8:130838600-130847600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
49	chr8:130838600-130852200	Weak transcription	Psoas Muscle	Psoas

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