The 2.0 version of rSNPBase

Variant report

Variant rs73720280
Chromosome Location chr6:5867246-5867247
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:5865600-5867400 Enhancers Dnd41 blood
2 chr6:5865800-5867400 Enhancers Fetal Thymus thymus
3 chr6:5866000-5867400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
4 chr6:5866000-5867600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
5 chr6:5866200-5867400 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
6 chr6:5866400-5867400 Flanking Active TSS Primary T cells from cord blood blood
7 chr6:5866400-5867400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
8 chr6:5866400-5867600 Active TSS Pancreatic Islets Pancreatic Islet
9 chr6:5866600-5867400 Flanking Active TSS Primary T cells fromperipheralblood blood
10 chr6:5866600-5867400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
11 chr6:5866600-5867400 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
12 chr6:5866600-5867400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
13 chr6:5866600-5867400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
14 chr6:5866600-5867400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
15 chr6:5866600-5867400 Active TSS Colon Smooth Muscle Colon
16 chr6:5866600-5867400 Active TSS Rectal Mucosa Donor 29 rectum
17 chr6:5866600-5867400 Active TSS Rectal Smooth Muscle rectum
18 chr6:5866600-5867400 Active TSS Skeletal Muscle Female skeletal muscle
19 chr6:5866600-5867400 Enhancers HSMM muscle
20 chr6:5866600-5867400 Active TSS NHLF lung
21 chr6:5866600-5867600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr6:5866800-5867400 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr6:5866800-5867400 Active TSS Colonic Mucosa Colon
24 chr6:5866800-5867400 Active TSS Duodenum Smooth Muscle Duodenum
25 chr6:5866800-5867400 Active TSS Fetal Lung lung
26 chr6:5866800-5867400 Active TSS Psoas Muscle Psoas
27 chr6:5866800-5867400 Active TSS Osteobl bone
28 chr6:5866800-5870000 Weak transcription Pancreas Pancrea
29 chr6:5867000-5867400 Enhancers Primary B cells from peripheral blood blood
30 chr6:5867000-5867400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
31 chr6:5867000-5867400 Active TSS Fetal Kidney kidney
32 chr6:5867000-5867400 Active TSS Skeletal Muscle Male skeletal muscle
33 chr6:5867000-5867600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr6:5867200-5867400 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
35 chr6:5867200-5867400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr6:5867200-5867400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr6:5867200-5867400 Enhancers Primary Natural Killer cells fromperipheralblood blood
38 chr6:5867200-5867400 Flanking Active TSS Adipose Nuclei Adipose
39 chr6:5867200-5867400 Active TSS Duodenum Mucosa Duodenum
40 chr6:5867200-5867400 Enhancers Fetal Adrenal Gland Adrenal Gland
41 chr6:5867200-5867400 Flanking Active TSS Rectal Mucosa Donor 31 rectum
42 chr6:5867200-5867400 Enhancers Sigmoid Colon Sigmoid Colon
43 chr6:5867200-5867400 Flanking Active TSS A549 lung
44 chr6:5867200-5867400 Active TSS GM12878-XiMat blood
45 chr6:5867200-5867400 Flanking Active TSS Hela-S3 cervix
46 chr6:5867200-5867400 Bivalent Enhancer HepG2 liver
47 chr6:5867200-5867600 Flanking Active TSS NHDF-Ad bronchial
48 chr6:5867200-5867800 Enhancers Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015