Variant report

Variant	rs73730532
Chromosome Location	chr6:37098227-37098228
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:37096514..37098920-chr6:37104351..37107169,3	K562	blood:
2	chr6:37097945..37100004-chr6:37103434..37105888,2	MCF-7	breast:
3	chr6:37097868..37100736-chr6:37102286..37104277,4	MCF-7	breast:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs11962008	1.00[EUR][1000 genomes]
rs9470473	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030015	chr6:36818510-37104446	Active TSS Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:97 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:37092600-37099200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr6:37092800-37102000	Weak transcription	Pancreas	Pancrea
3	chr6:37093800-37098800	Weak transcription	Primary hematopoietic stem cells	blood
4	chr6:37094000-37099000	Weak transcription	Spleen	Spleen
5	chr6:37094000-37099800	Enhancers	Placenta	Placenta
6	chr6:37094200-37098400	Weak transcription	Stomach Smooth Muscle	stomach
7	chr6:37094200-37098600	Weak transcription	Gastric	stomach
8	chr6:37094200-37099200	Weak transcription	Brain Hippocampus Middle	brain
9	chr6:37094400-37099000	Weak transcription	Brain Germinal Matrix	brain
10	chr6:37094400-37099000	Weak transcription	Fetal Brain Female	brain
11	chr6:37094400-37100000	Enhancers	Fetal Intestine Large	intestine
12	chr6:37094400-37100000	Enhancers	Fetal Intestine Small	intestine
13	chr6:37094600-37099000	Weak transcription	Cortex derived primary cultured neurospheres	brain
14	chr6:37094600-37099000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr6:37094600-37099000	Weak transcription	Fetal Stomach	stomach
16	chr6:37094800-37098400	Enhancers	A549	lung
17	chr6:37095000-37098600	Weak transcription	Lung	lung
18	chr6:37095200-37098400	Weak transcription	Fetal Lung	lung
19	chr6:37095400-37099200	Weak transcription	Brain Cingulate Gyrus	brain
20	chr6:37096000-37099200	Weak transcription	Right Atrium	heart
21	chr6:37096400-37098400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
22	chr6:37096400-37098400	Weak transcription	NHEK	skin
23	chr6:37096400-37098600	Weak transcription	Fetal Muscle Trunk	muscle
24	chr6:37096400-37099000	Weak transcription	Ovary	ovary
25	chr6:37096400-37099200	Weak transcription	Fetal Kidney	kidney
26	chr6:37096600-37098400	Weak transcription	HMEC	breast
27	chr6:37096600-37098400	Weak transcription	HSMMtube	muscle
28	chr6:37096600-37099000	Weak transcription	Adipose Nuclei	Adipose
29	chr6:37096600-37099200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
30	chr6:37096600-37099200	Weak transcription	H9 Cell Line	embryonic stem cell
31	chr6:37096600-37099200	Weak transcription	Placenta Amnion	Placenta Amnion
32	chr6:37096600-37099200	Weak transcription	Rectal Mucosa Donor 29	rectum
33	chr6:37096800-37098400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
34	chr6:37096800-37098400	Weak transcription	NHDF-Ad	bronchial
35	chr6:37096800-37098400	Weak transcription	NHLF	lung
36	chr6:37096800-37099000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
37	chr6:37096800-37099200	Weak transcription	HUES64 Cell Line	embryonic stem cell
38	chr6:37096800-37104800	Weak transcription	Right Ventricle	heart
39	chr6:37097000-37098400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
40	chr6:37097000-37098400	Weak transcription	Liver	Liver
41	chr6:37097000-37098600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
42	chr6:37097000-37099200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
43	chr6:37097000-37099200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
44	chr6:37097000-37099200	Weak transcription	Left Ventricle	heart
45	chr6:37097200-37099000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
46	chr6:37097600-37098600	Enhancers	GM12878-XiMat	blood
47	chr6:37097600-37098800	Enhancers	Primary B cells from cord blood	blood
48	chr6:37097600-37099200	Enhancers	Stomach Mucosa	stomach
49	chr6:37097600-37099600	Enhancers	Duodenum Mucosa	Duodenum
50	chr6:37097600-37099800	Enhancers	Primary monocytes fromperipheralblood	blood

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