Variant report

Variant	rs73734736
Chromosome Location	chr6:44671678-44671679
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs1000599	1.00[EUR][1000 genomes]
rs2093346	1.00[EUR][1000 genomes]
rs2396270	1.00[AMR][1000 genomes]
rs56793534	1.00[EUR][1000 genomes]
rs6905609	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6926912	1.00[EUR][1000 genomes]
rs73734734	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73734737	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7770848	1.00[EUR][1000 genomes]
rs7775570	1.00[EUR][1000 genomes]
rs9463016	1.00[EUR][1000 genomes]
rs9472333	1.00[EUR][1000 genomes]
rs9689949	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1817071	chr6:44670110-44698829	Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44665600-44673800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr6:44667200-44691000	Weak transcription	Right Atrium	heart
3	chr6:44670200-44672600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
4	chr6:44670400-44679200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr6:44670400-44679600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr6:44670800-44671800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr6:44670800-44671800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
8	chr6:44670800-44672200	Weak transcription	Spleen	Spleen
9	chr6:44670800-44673800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr6:44671400-44672800	Enhancers	GM12878-XiMat	blood
11	chr6:44671600-44673200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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