Variant report

Variant	rs7770848
Chromosome Location	chr6:44769237-44769238
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs1000599	1.00[EUR][1000 genomes]
rs2093346	1.00[EUR][1000 genomes]
rs56793534	1.00[EUR][1000 genomes]
rs6905609	1.00[EUR][1000 genomes]
rs6926912	1.00[EUR][1000 genomes]
rs73734734	1.00[EUR][1000 genomes]
rs73734736	1.00[EUR][1000 genomes]
rs73734737	1.00[EUR][1000 genomes]
rs7775570	1.00[EUR][1000 genomes]
rs9463016	1.00[EUR][1000 genomes]
rs9472333	1.00[EUR][1000 genomes]
rs9689949	1.00[EUR][1000 genomes]

Disease	PMID	Source
Asthma (childhood onset)	23829686	GWAS catalog

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44761800-44776200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr6:44767200-44769600	Enhancers	Psoas Muscle	Psoas
3	chr6:44767800-44769400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr6:44768000-44769400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr6:44768000-44769400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr6:44768000-44769400	Bivalent Enhancer	Fetal Muscle Leg	muscle
7	chr6:44768200-44769600	Bivalent Enhancer	Skeletal Muscle Male	skeletal muscle
8	chr6:44768400-44769400	Enhancers	Skeletal Muscle Female	skeletal muscle
9	chr6:44768400-44769600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr6:44768400-44772200	Weak transcription	Liver	Liver
11	chr6:44768600-44769400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr6:44768600-44772600	Weak transcription	Colon Smooth Muscle	Colon
13	chr6:44768800-44770000	Enhancers	Adipose Nuclei	Adipose
14	chr6:44768800-44772200	Weak transcription	Fetal Intestine Small	intestine
15	chr6:44768800-44772400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr6:44768800-44773400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr6:44769000-44769400	Weak transcription	Fetal Lung	lung
18	chr6:44769000-44770600	Enhancers	Primary monocytes fromperipheralblood	blood
19	chr6:44769000-44775400	Weak transcription	Pancreas	Pancrea
20	chr6:44769200-44769400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr6:44769200-44772200	Weak transcription	Fetal Intestine Large	intestine
22	chr6:44769200-44776000	Weak transcription	Ovary	ovary

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links