Variant report

Variant	rs73749100
Chromosome Location	chr6:81940553-81940554
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs56166038	0.90[AFR][1000 genomes]
rs58091605	1.00[AFR][1000 genomes]
rs59665108	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73748903	0.90[AFR][1000 genomes]
rs73749101	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73749102	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73751119	1.00[AFR][1000 genomes]
rs73751128	0.90[AFR][1000 genomes]
rs73751146	0.90[AFR][1000 genomes]
rs73751148	0.90[AFR][1000 genomes]
rs73751152	0.90[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886315	chr6:81352515-81946866	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv886320	chr6:81670720-81960107	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv604087	chr6:81792413-82326091	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv5372	chr6:81912685-81957712	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:81939600-81942000	Weak transcription	Dnd41	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
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