Variant report

Variant	rs73757811
Chromosome Location	chr5:57780544-57780545
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs57083630	1.00[AMR][1000 genomes]
rs57123442	1.00[AMR][1000 genomes]
rs58414332	1.00[AMR][1000 genomes]
rs6876683	1.00[AMR][1000 genomes]
rs73098311	1.00[AMR][1000 genomes]
rs73098368	1.00[AMR][1000 genomes]
rs73100304	1.00[AMR][1000 genomes]
rs7720795	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv598246	chr5:57777623-57785273	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57773200-57785400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr5:57778200-57782800	Enhancers	Primary B cells from peripheral blood	blood
3	chr5:57779000-57782400	Enhancers	Monocytes-CD14+_RO01746	blood
4	chr5:57779400-57783600	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr5:57780000-57781200	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr5:57780400-57781000	Flanking Active TSS	Primary B cells from cord blood	blood
7	chr5:57780400-57783000	Enhancers	Primary neutrophils fromperipheralblood	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links