Variant report

Variant	rs73781474
Chromosome Location	chr6:132564843-132564844
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs17061129	0.90[AFR][1000 genomes]
rs55672631	0.90[AFR][1000 genomes]
rs56201166	0.90[AFR][1000 genomes]
rs56384202	0.90[AFR][1000 genomes]
rs56737819	0.90[AFR][1000 genomes]
rs57294553	0.93[AFR][1000 genomes]
rs58428348	0.87[AFR][1000 genomes]
rs59235375	0.90[AFR][1000 genomes]
rs73779009	0.90[AFR][1000 genomes]
rs73779010	0.90[AFR][1000 genomes]
rs73781464	0.90[AFR][1000 genomes]
rs73781467	0.93[AFR][1000 genomes]
rs73781475	0.96[AFR][1000 genomes]
rs73781477	0.90[AFR][1000 genomes]
rs73781491	0.90[AFR][1000 genomes]
rs73781492	0.90[AFR][1000 genomes]
rs73781494	0.82[AFR][1000 genomes]
rs73781495	0.87[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762616	chr6:132404708-132584324	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases
2	nsv1024527	chr6:132532941-132571889	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:132564200-132568200	Weak transcription	NHLF	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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