Variant report

Variant	rs73815166
Chromosome Location	chr4:31032981-31032982
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs34272279	1.00[AMR][1000 genomes]
rs35375425	1.00[AMR][1000 genomes]
rs56721987	1.00[AMR][1000 genomes]
rs57420512	1.00[AMR][1000 genomes]
rs57684167	1.00[AMR][1000 genomes]
rs58976542	1.00[AMR][1000 genomes]
rs73812519	1.00[AMR][1000 genomes]
rs73812521	1.00[AMR][1000 genomes]
rs73812630	1.00[AMR][1000 genomes]
rs73812631	1.00[AMR][1000 genomes]
rs73812633	1.00[AMR][1000 genomes]
rs73812634	1.00[AMR][1000 genomes]
rs73812637	1.00[AMR][1000 genomes]
rs73812653	1.00[AMR][1000 genomes]
rs73812659	1.00[AMR][1000 genomes]
rs73812660	1.00[AMR][1000 genomes]
rs73812662	1.00[AMR][1000 genomes]
rs73812664	1.00[AMR][1000 genomes]
rs73812671	1.00[AMR][1000 genomes]
rs73812675	1.00[AMR][1000 genomes]
rs73812676	1.00[AMR][1000 genomes]
rs73812677	1.00[AMR][1000 genomes]
rs73812699	1.00[AMR][1000 genomes]
rs73812701	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv998450	chr4:30823631-31628179	Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:31031000-31033000	Enhancers	HUES64 Cell Line	embryonic stem cell
2	chr4:31031200-31033200	Enhancers	HUES48 Cell Line	embryonic stem cell
3	chr4:31031400-31033000	Enhancers	iPS-20b Cell Line	embryonic stem cell
4	chr4:31031400-31033200	Enhancers	iPS-18 Cell Line	embryonic stem cell
5	chr4:31031600-31033000	Enhancers	ES-I3 Cell Line	embryonic stem cell
6	chr4:31031600-31033200	Enhancers	H1 Cell Line	embryonic stem cell
7	chr4:31031600-31033200	Enhancers	iPS-15b Cell Line	embryonic stem cell
8	chr4:31032800-31033000	Enhancers	H9 Cell Line	embryonic stem cell
9	chr4:31032800-31033000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
10	chr4:31032800-31036400	Weak transcription	HUES6 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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