Variant report

Variant	rs73832868
Chromosome Location	chr4:100614213-100614214
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10516454	1.00[AFR][1000 genomes]
rs1352776	0.88[AFR][1000 genomes]
rs1388292	1.00[AFR][1000 genomes]
rs1388294	1.00[AFR][1000 genomes]
rs17029309	0.88[AFR][1000 genomes]
rs17029332	1.00[AFR][1000 genomes]
rs17029334	1.00[AFR][1000 genomes]
rs17029347	1.00[AFR][1000 genomes]
rs17029353	1.00[AFR][1000 genomes]
rs2201061	1.00[AFR][1000 genomes]
rs55995913	1.00[AFR][1000 genomes]
rs56205466	1.00[AFR][1000 genomes]
rs57550482	0.88[AFR][1000 genomes]
rs59023023	0.88[AFR][1000 genomes]
rs6818086	0.88[AFR][1000 genomes]
rs73832844	0.87[AFR][1000 genomes]
rs73832846	0.88[AFR][1000 genomes]
rs73832848	0.88[AFR][1000 genomes]
rs73832852	0.88[AFR][1000 genomes]
rs73832853	0.88[AFR][1000 genomes]
rs73832854	0.88[AFR][1000 genomes]
rs73832856	0.88[AFR][1000 genomes]
rs73832859	0.88[AFR][1000 genomes]
rs73832861	0.88[AFR][1000 genomes]
rs73832862	1.00[AFR][1000 genomes]
rs73832863	1.00[AFR][1000 genomes]
rs73832864	1.00[AFR][1000 genomes]
rs73832865	1.00[AFR][1000 genomes]
rs73832886	1.00[AFR][1000 genomes]
rs73832888	1.00[AFR][1000 genomes]
rs73832889	1.00[AFR][1000 genomes]
rs73832891	1.00[AFR][1000 genomes]
rs73832898	1.00[AFR][1000 genomes]
rs7670745	0.88[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933074	chr4:100460951-100630600	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:100612800-100618000	Weak transcription	Psoas Muscle	Psoas
2	chr4:100613800-100614400	Enhancers	ES-I3 Cell Line	embryonic stem cell
3	chr4:100614000-100614400	Enhancers	iPS-20b Cell Line	embryonic stem cell
4	chr4:100614000-100614800	Enhancers	H1 Cell Line	embryonic stem cell
5	chr4:100614000-100615000	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr4:100614200-100615200	Enhancers	HUES48 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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