Variant report

Variant	rs73846405
Chromosome Location	chr4:128025479-128025480
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs56816340	1.00[AFR][1000 genomes]
rs58845525	0.89[AFR][1000 genomes]
rs60435611	0.84[AFR][1000 genomes]
rs60891697	0.95[AFR][1000 genomes]
rs73846487	0.89[AFR][1000 genomes]
rs73848058	0.90[AFR][1000 genomes]
rs73848059	0.90[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879914	chr4:128005362-128123638	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:128023200-128025800	Enhancers	Fetal Lung	lung
2	chr4:128024000-128025800	Enhancers	Breast Myoepithelial Primary Cells	Breast
3	chr4:128024800-128025600	Enhancers	Brain Cingulate Gyrus	brain
4	chr4:128024800-128025600	Enhancers	Colon Smooth Muscle	Colon
5	chr4:128024800-128025600	Enhancers	Fetal Brain Male	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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