The 2.0 version of rSNPBase

Variant report

Variant rs73846993
Chromosome Location chr4:129740966-129740967
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:129734000-129741600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr4:129734200-129746200 Weak transcription Fetal Muscle Trunk muscle
3 chr4:129734200-129746200 Weak transcription Ovary ovary
4 chr4:129734200-129746800 Weak transcription Fetal Stomach stomach
5 chr4:129734200-129747000 Weak transcription Placenta Amnion Placenta Amnion
6 chr4:129734400-129742400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr4:129734400-129745600 Weak transcription Fetal Intestine Large intestine
8 chr4:129734400-129746000 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr4:129734400-129746000 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr4:129734400-129746200 Weak transcription Fetal Muscle Leg muscle
11 chr4:129734400-129751600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr4:129734400-129756400 Weak transcription Aorta Aorta
13 chr4:129734600-129743200 Weak transcription Cortex derived primary cultured neurospheres brain
14 chr4:129734600-129743800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr4:129734600-129743800 Weak transcription NHEK skin
16 chr4:129734600-129745600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr4:129734600-129746400 Weak transcription Right Ventricle heart
18 chr4:129735000-129743200 Weak transcription Adipose Nuclei Adipose
19 chr4:129735000-129747000 Weak transcription Primary B cells from cord blood blood
20 chr4:129735200-129746400 Weak transcription Stomach Smooth Muscle stomach
21 chr4:129735400-129744000 Weak transcription Hela-S3 cervix
22 chr4:129735400-129748200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr4:129735400-129752200 Weak transcription Fetal Brain Female brain
24 chr4:129736400-129741800 Genic enhancers HUES6 Cell Line embryonic stem cell
25 chr4:129736600-129741200 Genic enhancers A549 lung
26 chr4:129736600-129741800 Genic enhancers HUES48 Cell Line embryonic stem cell
27 chr4:129736600-129744600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
28 chr4:129737000-129741000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr4:129737000-129743200 Weak transcription HUVEC blood vessel
30 chr4:129737400-129741200 Genic enhancers Primary T helper cells fromperipheralblood blood
31 chr4:129737600-129741200 Strong transcription Primary hematopoietic stem cells short term culture blood
32 chr4:129737600-129741800 Genic enhancers iPS-18 Cell Line embryonic stem cell
33 chr4:129737800-129741200 Enhancers Primary T helper naive cells fromperipheralblood blood
34 chr4:129737800-129744800 Weak transcription Pancreatic Islets Pancreatic Islet
35 chr4:129738400-129744400 Enhancers ES-I3 Cell Line embryonic stem cell
36 chr4:129738600-129741000 Strong transcription Fetal Thymus thymus
37 chr4:129738600-129749200 Enhancers Primary T helper cells PMA-I stimulated --
38 chr4:129739000-129741200 Genic enhancers ES-UCSF4 Cell Line embryonic stem cell
39 chr4:129739000-129743000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr4:129739400-129741200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr4:129739400-129741200 Enhancers Primary T killer naive cells fromperipheralblood blood
42 chr4:129739400-129741600 Enhancers Primary Natural Killer cells fromperipheralblood blood
43 chr4:129739400-129741600 Enhancers Pancreas Pancrea
44 chr4:129739400-129744000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr4:129739600-129741200 Enhancers Primary T helper 17 cells PMA-I stimulated --
46 chr4:129739600-129741400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr4:129739600-129741800 Enhancers ES-WA7 Cell Line embryonic stem cell
48 chr4:129739600-129741800 Enhancers Psoas Muscle Psoas
49 chr4:129739800-129741000 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
50 chr4:129739800-129741000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell

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Last update: Aug 31, 2015