The 2.0 version of rSNPBase

Variant report

Variant rs73850005
Chromosome Location chr4:129762208-129762209
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:129746800-129770200 Weak transcription HMEC breast
2 chr4:129747000-129766600 Weak transcription NHEK skin
3 chr4:129752400-129763800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr4:129753000-129766200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr4:129753200-129763800 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr4:129753200-129767600 Weak transcription Colonic Mucosa Colon
7 chr4:129753400-129764000 Weak transcription Fetal Brain Female brain
8 chr4:129753400-129766000 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr4:129753400-129767600 Weak transcription Fetal Brain Male brain
10 chr4:129753600-129767600 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr4:129753600-129798600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr4:129753800-129770400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr4:129753800-129795000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr4:129754400-129770600 Weak transcription Fetal Kidney kidney
15 chr4:129755000-129763000 Enhancers Fetal Heart heart
16 chr4:129755400-129764800 Weak transcription Pancreatic Islets Pancreatic Islet
17 chr4:129756600-129763800 Weak transcription Hela-S3 cervix
18 chr4:129756800-129763800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr4:129756800-129764200 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr4:129757000-129764600 Weak transcription Brain Angular Gyrus brain
21 chr4:129757000-129770000 Weak transcription Small Intestine intestine
22 chr4:129757200-129762400 Weak transcription Esophagus oesophagus
23 chr4:129757200-129762600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr4:129757200-129763200 Enhancers Skeletal Muscle Female skeletal muscle
25 chr4:129757200-129763800 Weak transcription Primary hematopoietic stem cells blood
26 chr4:129757200-129763800 Weak transcription Brain Anterior Caudate brain
27 chr4:129757200-129764000 Weak transcription Primary monocytes fromperipheralblood blood
28 chr4:129757200-129764000 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr4:129757200-129764200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr4:129757200-129764200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr4:129757200-129764200 Weak transcription Brain Inferior Temporal Lobe brain
32 chr4:129757200-129764400 Weak transcription HSMMtube muscle
33 chr4:129757200-129764600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr4:129757200-129765000 Weak transcription Spleen Spleen
35 chr4:129757200-129765200 Weak transcription Rectal Smooth Muscle rectum
36 chr4:129757200-129768200 Weak transcription Fetal Lung lung
37 chr4:129757400-129762600 Enhancers Primary T helper naive cells fromperipheralblood blood
38 chr4:129757400-129763400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr4:129757400-129763800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
40 chr4:129757400-129763800 Weak transcription Brain Germinal Matrix brain
41 chr4:129757400-129764200 Weak transcription Primary neutrophils fromperipheralblood blood
42 chr4:129757400-129764600 Weak transcription Brain Hippocampus Middle brain
43 chr4:129757400-129765000 Weak transcription Brain Substantia Nigra brain
44 chr4:129757400-129765600 Weak transcription Muscle Satellite Cultured Cells --
45 chr4:129757400-129766000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr4:129757400-129766200 Weak transcription Colon Smooth Muscle Colon
47 chr4:129758200-129763800 Weak transcription NH-A brain
48 chr4:129758400-129762800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
49 chr4:129758400-129763000 Genic enhancers iPS-20b Cell Line embryonic stem cell
50 chr4:129758400-129763600 Weak transcription Fetal Intestine Large intestine

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Last update: Aug 31, 2015