Variant report

Variant	rs73876320
Chromosome Location	chr3:157241978-157241979
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs16847092	1.00[AMR][1000 genomes]
rs56813077	1.00[AMR][1000 genomes]
rs57711198	1.00[AMR][1000 genomes]
rs58409217	1.00[AMR][1000 genomes]
rs59725665	1.00[AMR][1000 genomes]
rs73013648	1.00[AMR][1000 genomes]
rs73013688	1.00[AMR][1000 genomes]
rs73013690	1.00[AMR][1000 genomes]
rs73013700	1.00[AMR][1000 genomes]
rs73013701	1.00[AMR][1000 genomes]
rs73015513	1.00[AMR][1000 genomes]
rs73015516	1.00[AMR][1000 genomes]
rs73015533	1.00[AMR][1000 genomes]
rs73015537	1.00[AMR][1000 genomes]
rs73015558	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2757900	chr3:157090166-157254684	Weak transcription Strong transcription Bivalent/Poised TSS Bivalent Enhancer Enhancers Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases
2	esv2759193	chr3:157090166-157254684	Active TSS Enhancers Strong transcription Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:157221800-157244800	Weak transcription	NH-A	brain
2	chr3:157239000-157243200	Strong transcription	HUVEC	blood vessel
3	chr3:157240800-157245000	Weak transcription	Fetal Lung	lung
4	chr3:157241200-157243000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
5	chr3:157241600-157242200	Strong transcription	Osteobl	bone
6	chr3:157241800-157242000	ZNF genes & repeats	HSMM	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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