Variant report

Variant	rs73015533
Chromosome Location	chr3:157290189-157290190
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr3:157250133..157251476-chr3:157290115..157290970,5	MCF-7	breast:
2	chr3:157250078..157251236-chr3:157290040..157291215,13	MCF-7	breast:
3	chr3:157250059..157251152-chr3:157289843..157291108,8	K562	blood:

Variant related genes	Relation type
ENSG00000197415	Chromatin interaction

rs_ID	r²[population]
rs11508696	0.87[AFR][1000 genomes]
rs1596343	0.87[AFR][1000 genomes]
rs1596346	0.87[AFR][1000 genomes]
rs1596347	0.87[AFR][1000 genomes]
rs1596348	0.87[AFR][1000 genomes]
rs16827846	0.87[AFR][1000 genomes]
rs16847092	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17406704	0.93[AFR][1000 genomes]
rs1822395	0.87[AFR][1000 genomes]
rs1822397	0.87[AFR][1000 genomes]
rs1838140	0.95[AFR][1000 genomes]
rs2218357	0.87[AFR][1000 genomes]
rs4299437	0.87[AFR][1000 genomes]
rs56813077	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56978441	0.87[AFR][1000 genomes]
rs57302345	0.87[AFR][1000 genomes]
rs57402090	0.87[AFR][1000 genomes]
rs57711198	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58228461	0.87[AFR][1000 genomes]
rs58409217	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59725665	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60053317	0.82[AFR][1000 genomes]
rs60056712	0.87[AFR][1000 genomes]
rs66492295	0.87[AFR][1000 genomes]
rs66507550	0.87[AFR][1000 genomes]
rs66590639	0.87[AFR][1000 genomes]
rs66677173	0.95[AFR][1000 genomes]
rs66748594	0.87[AFR][1000 genomes]
rs66920133	0.95[AFR][1000 genomes]
rs67109050	0.83[AFR][1000 genomes]
rs67214719	0.87[AFR][1000 genomes]
rs67317271	0.87[AFR][1000 genomes]
rs67342635	0.87[AFR][1000 genomes]
rs67400547	0.95[AFR][1000 genomes]
rs67679572	0.87[AFR][1000 genomes]
rs67835528	0.95[AFR][1000 genomes]
rs67962803	0.81[AFR][1000 genomes]
rs67990725	0.87[AFR][1000 genomes]
rs68073943	0.87[AFR][1000 genomes]
rs73013648	1.00[AMR][1000 genomes]
rs73013688	1.00[AMR][1000 genomes]
rs73013690	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73013700	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73013701	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73015513	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73015516	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73015531	0.87[AFR][1000 genomes]
rs73015537	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73015558	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73015562	0.81[AFR][1000 genomes]
rs73876320	1.00[AMR][1000 genomes]
rs7649021	0.87[AFR][1000 genomes]

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:157266000-157298800	Weak transcription	Muscle Satellite Cultured Cells	--
2	chr3:157279600-157290600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr3:157286400-157290600	Weak transcription	Adipose Nuclei	Adipose
4	chr3:157286600-157290400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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