Variant report

Variant	rs73881763
Chromosome Location	chr22:33012123-33012124
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs16990867	0.94[EUR][1000 genomes]
rs28373783	0.94[EUR][1000 genomes]
rs55742512	1.00[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs55904255	0.94[EUR][1000 genomes]
rs56315097	0.94[EUR][1000 genomes]
rs58659637	0.94[EUR][1000 genomes]
rs7284915	0.94[EUR][1000 genomes]
rs7290002	0.94[EUR][1000 genomes]
rs7290248	0.94[EUR][1000 genomes]
rs7291390	0.94[EUR][1000 genomes]
rs73881769	0.94[EUR][1000 genomes]
rs73881771	0.94[EUR][1000 genomes]
rs9619279	0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1055541	chr22:33006967-33101138	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	esv2762119	chr22:33006967-33101150	Enhancers Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:33004000-33012600	Weak transcription	Fetal Lung	lung
2	chr22:33010200-33012400	Weak transcription	Spleen	Spleen
3	chr22:33010400-33013000	Weak transcription	Fetal Kidney	kidney
4	chr22:33010400-33017400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr22:33011400-33015800	Enhancers	Fetal Stomach	stomach
6	chr22:33011600-33012200	Enhancers	H1 Cell Line	embryonic stem cell
7	chr22:33011600-33012200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr22:33011600-33012400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr22:33011600-33012600	Enhancers	ES-I3 Cell Line	embryonic stem cell
10	chr22:33011600-33012600	Enhancers	Placenta	Placenta
11	chr22:33011600-33015000	Enhancers	Breast Myoepithelial Primary Cells	Breast
12	chr22:33011600-33015200	Enhancers	Fetal Muscle Trunk	muscle
13	chr22:33011600-33015200	Enhancers	Fetal Muscle Leg	muscle
14	chr22:33011800-33012200	Enhancers	HUES6 Cell Line	embryonic stem cell
15	chr22:33011800-33012200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
16	chr22:33011800-33012400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
17	chr22:33011800-33012600	Enhancers	Fetal Heart	heart
18	chr22:33011800-33012600	Enhancers	Lung	lung
19	chr22:33011800-33012600	Enhancers	Right Atrium	heart
20	chr22:33011800-33012800	Flanking Active TSS	HepG2	liver
21	chr22:33011800-33013000	Enhancers	Left Ventricle	heart
22	chr22:33011800-33014400	Enhancers	Placenta Amnion	Placenta Amnion
23	chr22:33011800-33015200	Weak transcription	Hela-S3	cervix
24	chr22:33012000-33012200	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
25	chr22:33012000-33012200	Enhancers	Esophagus	oesophagus
26	chr22:33012000-33012200	Enhancers	Rectal Mucosa Donor 29	rectum
27	chr22:33012000-33012200	Enhancers	Right Ventricle	heart
28	chr22:33012000-33012200	Enhancers	Small Intestine	intestine
29	chr22:33012000-33012200	Enhancers	Stomach Smooth Muscle	stomach
30	chr22:33012000-33012400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
31	chr22:33012000-33016000	Enhancers	Fetal Adrenal Gland	Adrenal Gland

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