The 2.0 version of rSNPBase

Variant report

Variant rs73901615
Chromosome Location chr20:16350674-16350675
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:16315400-16364400 Weak transcription Rectal Smooth Muscle rectum
2 chr20:16315800-16357600 Weak transcription Right Ventricle heart
3 chr20:16316000-16384400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr20:16318800-16368200 Weak transcription Primary B cells from cord blood blood
5 chr20:16334000-16377400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr20:16341200-16371600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
7 chr20:16342600-16377400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr20:16343600-16366800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr20:16343600-16384600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr20:16343800-16351800 Weak transcription HSMM muscle
11 chr20:16343800-16356800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr20:16344000-16352400 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr20:16344400-16380200 Weak transcription HSMMtube muscle
14 chr20:16344800-16359400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr20:16344800-16360800 Strong transcription Rectal Mucosa Donor 31 rectum
16 chr20:16344800-16371400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr20:16344800-16377400 Weak transcription Brain Angular Gyrus brain
18 chr20:16345000-16351200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr20:16345000-16351200 Strong transcription Duodenum Mucosa Duodenum
20 chr20:16345000-16391200 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr20:16345200-16359400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr20:16345400-16353200 Strong transcription Adipose Nuclei Adipose
23 chr20:16345400-16377400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr20:16345400-16391000 Weak transcription Brain Germinal Matrix brain
25 chr20:16345800-16351000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr20:16346000-16351200 Strong transcription Liver Liver
27 chr20:16346200-16350800 Strong transcription NHEK skin
28 chr20:16346200-16351000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
29 chr20:16346200-16359200 Weak transcription Fetal Brain Female brain
30 chr20:16346400-16363200 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr20:16346600-16351600 Strong transcription Primary T helper cells fromperipheralblood blood
32 chr20:16346600-16354600 Weak transcription Aorta Aorta
33 chr20:16346600-16362400 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr20:16346600-16393600 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr20:16346800-16359600 Weak transcription Placenta Placenta
36 chr20:16347200-16351200 Strong transcription Breast Myoepithelial Primary Cells Breast
37 chr20:16347200-16368200 Weak transcription Primary monocytes fromperipheralblood blood
38 chr20:16347400-16360000 Weak transcription Primary hematopoietic stem cells blood
39 chr20:16347600-16392000 Weak transcription Fetal Kidney kidney
40 chr20:16347800-16351200 Strong transcription Primary T cells fromperipheralblood blood
41 chr20:16348000-16350800 Strong transcription Primary T helper cells PMA-I stimulated --
42 chr20:16348200-16352800 Strong transcription Left Ventricle heart
43 chr20:16348400-16383600 Weak transcription Small Intestine intestine
44 chr20:16348600-16350800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr20:16348800-16356800 Weak transcription HUES48 Cell Line embryonic stem cell
46 chr20:16348800-16359400 Weak transcription Fetal Brain Male brain
47 chr20:16348800-16361800 Weak transcription Thymus Thymus
48 chr20:16349000-16354400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr20:16349000-16359400 Weak transcription Gastric stomach
50 chr20:16349000-16371800 Weak transcription Stomach Mucosa stomach

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Last update: Aug 31, 2015