The 2.0 version of rSNPBase

Variant report

Variant rs73924913
Chromosome Location chr2:39962690-39962691
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:39942000-39963000 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr2:39944400-39976600 Weak transcription Fetal Brain Male brain
3 chr2:39951000-39963600 Weak transcription Pancreas Pancrea
4 chr2:39951000-39964800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr2:39951200-39964800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr2:39951400-39963800 Weak transcription H9 Cell Line embryonic stem cell
7 chr2:39952000-39964800 Weak transcription Rectal Smooth Muscle rectum
8 chr2:39956000-39962800 Weak transcription HUVEC blood vessel
9 chr2:39956200-39966400 Weak transcription Small Intestine intestine
10 chr2:39956600-39962800 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr2:39956600-39963400 Weak transcription Ovary ovary
12 chr2:39956800-39964600 Weak transcription Placenta Amnion Placenta Amnion
13 chr2:39957400-39971200 Strong transcription Primary T cells from cord blood blood
14 chr2:39957600-39963200 Strong transcription Fetal Lung lung
15 chr2:39957600-39964200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr2:39958400-39963800 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr2:39958800-39964400 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr2:39958800-39964600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
19 chr2:39959000-39971200 Strong transcription Fetal Thymus thymus
20 chr2:39959400-39966400 Strong transcription Fetal Intestine Large intestine
21 chr2:39959400-39967400 Strong transcription A549 lung
22 chr2:39959400-39971000 Strong transcription Monocytes-CD14+_RO01746 blood
23 chr2:39959400-39974200 Strong transcription Primary B cells from cord blood blood
24 chr2:39959600-39963800 Weak transcription Esophagus oesophagus
25 chr2:39959600-39967200 Strong transcription HepG2 liver
26 chr2:39959800-39967000 Genic enhancers Breast Myoepithelial Primary Cells Breast
27 chr2:39960000-39962800 Weak transcription Right Ventricle heart
28 chr2:39960000-39963200 Weak transcription Brain Germinal Matrix brain
29 chr2:39960000-39964800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr2:39960000-39964800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr2:39960000-39969000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr2:39960000-39971000 Strong transcription K562 blood
33 chr2:39960000-39971200 Strong transcription Fetal Muscle Trunk muscle
34 chr2:39960000-39971400 Strong transcription Primary hematopoietic stem cells short term culture blood
35 chr2:39960000-39971800 Strong transcription Primary monocytes fromperipheralblood blood
36 chr2:39960200-39963800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr2:39960200-39963800 Weak transcription Brain Anterior Caudate brain
38 chr2:39960200-39965000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
39 chr2:39960200-39971000 Strong transcription Fetal Muscle Leg muscle
40 chr2:39960200-39973800 Strong transcription Primary hematopoietic stem cells blood
41 chr2:39960200-39987200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr2:39960400-39965000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr2:39960400-39970200 Strong transcription GM12878-XiMat blood
44 chr2:39960400-39973600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr2:39960400-39983000 Weak transcription Stomach Mucosa stomach
46 chr2:39960600-39963800 Weak transcription Brain Cingulate Gyrus brain
47 chr2:39960600-39963800 Weak transcription Psoas Muscle Psoas
48 chr2:39960600-39964600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr2:39960800-39962800 Weak transcription Primary T regulatory cells fromperipheralblood blood
50 chr2:39960800-39964600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015