Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:55275957..55278477-chr2:55309123..55311795,3	MCF-7	breast:
2	chr2:55309144..55311661-chr2:55314427..55318457,3	K562	blood:

Variant related genes	Relation type
ENSG00000115310	Chromatin interaction

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1012603	0.84[EUR][1000 genomes]
rs10496034	0.80[EUR][1000 genomes]
rs10496040	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11887323	0.86[ASN][1000 genomes]
rs17046514	0.84[EUR][1000 genomes]
rs17046643	0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17046658	0.88[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2028728	0.80[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2241958	0.90[EUR][1000 genomes]
rs4233955	0.80[EUR][1000 genomes]
rs4671995	0.80[EUR][1000 genomes]
rs4671997	0.80[EUR][1000 genomes]
rs4672006	0.80[EUR][1000 genomes]
rs4672009	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4672011	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs57737203	0.84[EUR][1000 genomes]
rs60553807	0.86[EUR][1000 genomes]
rs60989687	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6724138	0.83[ASN][1000 genomes]
rs73936818	0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:55299200-55318000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr2:55308800-55312000	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr2:55309200-55312000	Enhancers	Primary neutrophils fromperipheralblood	blood
4	chr2:55309200-55315200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr2:55310200-55313400	Enhancers	Fetal Lung	lung
6	chr2:55310800-55312200	Enhancers	Adipose Nuclei	Adipose
7	chr2:55311000-55311800	Enhancers	Monocytes-CD14+_RO01746	blood
8	chr2:55311000-55313400	Enhancers	HUVEC	blood vessel
9	chr2:55311200-55312000	Enhancers	Lung	lung
10	chr2:55311200-55314600	Weak transcription	Hela-S3	cervix
11	chr2:55311200-55314800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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