Variant report

Variant	rs7397471
Chromosome Location	chr12:63214773-63214774
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs11174687	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11174690	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12299234	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12303102	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12310765	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12314531	0.81[ASN][1000 genomes]
rs12314598	0.89[ASN][1000 genomes]
rs12314963	0.89[ASN][1000 genomes]
rs12317932	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12321622	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs17098378	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs34031846	0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4762981	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4763031	0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4763032	0.87[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4763033	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4763036	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4763039	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs58419885	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60201508	0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61921197	0.97[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61921199	0.97[AFR][1000 genomes];0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61922299	0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61922302	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs61922305	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs61922306	0.89[ASN][1000 genomes]
rs7311022	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7311342	0.84[EUR][1000 genomes]
rs7316591	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7397483	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74097105	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7955839	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7968796	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7977929	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:63195800-63228600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr12:63196000-63225800	Weak transcription	Gastric	stomach
3	chr12:63207200-63221000	Weak transcription	HepG2	liver
4	chr12:63207200-63228600	Weak transcription	A549	lung
5	chr12:63207200-63231200	Weak transcription	Pancreas	Pancrea
6	chr12:63207400-63219400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr12:63211800-63228000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr12:63211800-63228200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr12:63211800-63228200	Weak transcription	Aorta	Aorta
10	chr12:63212000-63225600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
11	chr12:63212000-63228200	Weak transcription	H9 Cell Line	embryonic stem cell
12	chr12:63212200-63222800	Weak transcription	HUES48 Cell Line	embryonic stem cell
13	chr12:63212200-63223200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
14	chr12:63212200-63227800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
15	chr12:63212400-63224400	Weak transcription	HUES64 Cell Line	embryonic stem cell
16	chr12:63212400-63224600	Weak transcription	Brain Inferior Temporal Lobe	brain
17	chr12:63212400-63228200	Weak transcription	H1 Cell Line	embryonic stem cell
18	chr12:63212400-63228200	Weak transcription	Brain Cingulate Gyrus	brain
19	chr12:63212400-63228400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr12:63212400-63228600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
21	chr12:63212400-63228800	Weak transcription	Brain Anterior Caudate	brain
22	chr12:63212400-63229000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
23	chr12:63212600-63221200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
24	chr12:63212600-63221600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
25	chr12:63212600-63221600	Weak transcription	Brain Angular Gyrus	brain
26	chr12:63212600-63227200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
27	chr12:63212600-63234600	Weak transcription	Primary hematopoietic stem cells	blood
28	chr12:63212800-63222000	Weak transcription	Left Ventricle	heart
29	chr12:63213800-63225200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
30	chr12:63214000-63228400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
31	chr12:63214400-63224400	Weak transcription	Fetal Intestine Small	intestine

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