The 2.0 version of rSNPBase

Variant report

Variant rs73976182
Chromosome Location chr2:178188078-178188079
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:178147800-178190800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr2:178160800-178196200 Weak transcription Ovary ovary
3 chr2:178175200-178203000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr2:178175600-178191200 Weak transcription Primary T helper cells fromperipheralblood blood
5 chr2:178175600-178191600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr2:178175600-178191800 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr2:178175800-178191000 Weak transcription Primary T helper naive cells fromperipheralblood blood
8 chr2:178176200-178191600 Weak transcription Thymus Thymus
9 chr2:178176400-178191400 Weak transcription Primary T helper cells PMA-I stimulated --
10 chr2:178178600-178191200 Weak transcription Aorta Aorta
11 chr2:178179200-178196600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr2:178179800-178189400 Weak transcription HSMMtube muscle
13 chr2:178179800-178190000 Weak transcription Muscle Satellite Cultured Cells --
14 chr2:178179800-178191800 Weak transcription K562 blood
15 chr2:178179800-178196800 Weak transcription Fetal Brain Female brain
16 chr2:178179800-178196800 Weak transcription Osteobl bone
17 chr2:178180400-178196400 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr2:178180800-178196400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr2:178182000-178190000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr2:178182000-178192000 Weak transcription Primary T cells fromperipheralblood blood
21 chr2:178182400-178196800 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr2:178182800-178196600 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr2:178184000-178196400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr2:178184400-178196600 Weak transcription Rectal Smooth Muscle rectum
25 chr2:178184800-178192200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr2:178184800-178196800 Weak transcription Primary B cells from peripheral blood blood
27 chr2:178185400-178191400 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr2:178185400-178191600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr2:178185600-178192600 Weak transcription Right Ventricle heart
30 chr2:178185800-178190000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr2:178185800-178190000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr2:178186400-178189000 Weak transcription Brain Germinal Matrix brain
33 chr2:178186400-178192200 Enhancers HMEC breast
34 chr2:178186600-178188200 Strong transcription Primary neutrophils fromperipheralblood blood
35 chr2:178187000-178188200 Strong transcription Brain Hippocampus Middle brain
36 chr2:178187000-178188400 Enhancers Fetal Intestine Large intestine
37 chr2:178187000-178191000 Enhancers Duodenum Mucosa Duodenum
38 chr2:178187000-178191200 Enhancers Liver Liver
39 chr2:178187000-178192600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr2:178187000-178194000 Enhancers Breast Myoepithelial Primary Cells Breast
41 chr2:178187200-178188200 Enhancers Rectal Mucosa Donor 29 rectum
42 chr2:178187200-178193000 Enhancers Stomach Mucosa stomach
43 chr2:178187400-178188200 Enhancers ES-I3 Cell Line embryonic stem cell
44 chr2:178187400-178189400 Weak transcription Placenta Placenta
45 chr2:178187400-178189800 Weak transcription HSMM muscle
46 chr2:178187400-178196800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr2:178187400-178196800 Weak transcription Esophagus oesophagus
48 chr2:178187600-178188200 Enhancers Fetal Kidney kidney
49 chr2:178187600-178188800 Enhancers Fetal Intestine Small intestine
50 chr2:178187600-178190400 Weak transcription Small Intestine intestine

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Last update: Aug 31, 2015