Variant report

Variant	rs73985237
Chromosome Location	chr17:38121675-38121676
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs56068869	1.00[EUR][1000 genomes]
rs56258044	1.00[EUR][1000 genomes]
rs56355746	1.00[EUR][1000 genomes]
rs73985235	1.00[EUR][1000 genomes]
rs73985236	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv492308	chr17:38033039-38204458	Weak transcription Transcr. at gene 5' and 3' Active TSS Strong transcription Enhancers Genic enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	28 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:38110800-38128800	Weak transcription	Gastric	stomach
2	chr17:38111600-38126800	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr17:38115600-38125000	Weak transcription	Duodenum Mucosa	Duodenum
4	chr17:38115800-38123000	Weak transcription	Primary neutrophils fromperipheralblood	blood
5	chr17:38116200-38123400	Weak transcription	Primary B cells from cord blood	blood
6	chr17:38119000-38122400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr17:38120600-38121800	Weak transcription	Primary T cells fromperipheralblood	blood
8	chr17:38120600-38121800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
9	chr17:38120600-38122000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
10	chr17:38120600-38123200	Weak transcription	HMEC	breast
11	chr17:38120600-38123400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
12	chr17:38121000-38121800	Enhancers	Primary monocytes fromperipheralblood	blood
13	chr17:38121000-38122800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr17:38121000-38122800	Weak transcription	NHEK	skin
15	chr17:38121200-38121800	Bivalent Enhancer	Fetal Stomach	stomach
16	chr17:38121200-38122000	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr17:38121600-38121800	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
18	chr17:38121600-38122000	Enhancers	Placenta	Placenta
19	chr17:38121600-38122200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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