Variant report

Variant	rs74021567
Chromosome Location	chr15:73211605-73211606
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs1449268	0.83[ASN][1000 genomes]
rs16957452	1.00[ASN][1000 genomes]
rs73434008	0.83[ASN][1000 genomes]
rs74021561	1.00[ASN][1000 genomes]
rs74021564	1.00[ASN][1000 genomes]
rs8025131	1.00[ASN][1000 genomes]
rs8037273	1.00[ASN][1000 genomes]
rs8042891	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs895905	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3352103	chr15:73191535-73454001	Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:73204800-73212200	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr15:73208800-73212200	Weak transcription	Fetal Brain Male	brain
3	chr15:73209400-73212000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr15:73209600-73212200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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