Variant report

No data

(count:21 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:75041437..75045142-chr15:75051536..75054125,3	K562	blood:
2	chr15:74675629..74677365-chr15:75051109..75053785,2	K562	blood:
3	chr15:75051203..75056019-chr15:75070917..75077277,10	K562	blood:
4	chr15:74906445..74912146-chr15:75051101..75055740,8	K562	blood:
5	chr15:74985945..74987944-chr15:75051240..75054406,3	K562	blood:
6	chr15:74894427..74896145-chr15:75051491..75054260,2	K562	blood:
7	chr15:75025853..75028431-chr15:75051369..75053077,3	K562	blood:
8	chr15:74934635..74938878-chr15:75051211..75054308,5	K562	blood:
9	chr15:74912136..74916379-chr15:75051142..75054460,5	K562	blood:
10	chr15:75051301..75054490-chr15:75071313..75075303,5	K562	blood:
11	chr15:74968474..74971809-chr15:75051252..75053617,3	K562	blood:
12	chr15:75051545..75054051-chr15:75061447..75064196,2	K562	blood:
13	chr15:74928554..74932051-chr15:75050026..75053131,3	K562	blood:
14	chr15:74923745..74927577-chr15:75051297..75054526,4	K562	blood:
15	chr15:74947623..74950435-chr15:75051596..75055005,3	K562	blood:
16	chr15:75001276..75003833-chr15:75051566..75054281,2	K562	blood:
17	chr15:74906445..74909695-chr15:75051594..75054870,4	K562	blood:
18	chr15:74937309..74940220-chr15:75050059..75052709,2	K562	blood:
19	chr15:74923400..74930525-chr15:75051156..75055719,14	K562	blood:
20	chr15:75051136..75052999-chr15:75065266..75067915,2	K562	blood:
21	chr15:74710597..74712982-chr15:75051460..75053643,2	K562	blood:

No data

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11072501	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11631198	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11636419	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11637770	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12593213	0.87[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12593233	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12593808	0.96[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17861162	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56931723	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs58806801	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs74025836	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74025838	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs74025840	0.84[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv904380	chr15:74869438-75142761	Flanking Active TSS Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
2	nsv833055	chr15:74988344-75166288	Weak transcription Active TSS Genic enhancers Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	46 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:75044800-75062600	Weak transcription	Right Atrium	heart
2	chr15:75045600-75053600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr15:75047200-75063000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
4	chr15:75047400-75054000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr15:75049400-75054600	Weak transcription	Spleen	Spleen
6	chr15:75050800-75052000	Enhancers	Liver	Liver
7	chr15:75051200-75053000	Enhancers	HepG2	liver
8	chr15:75051600-75051800	Bivalent Enhancer	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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