The 2.0 version of rSNPBase

Variant report

Variant rs74069324
Chromosome Location chr12:21809270-21809271
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:21781200-21809600 Weak transcription Small Intestine intestine
2 chr12:21788600-21810000 Weak transcription Liver Liver
3 chr12:21791800-21809400 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr12:21798800-21809600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr12:21804200-21810000 Weak transcription Stomach Mucosa stomach
6 chr12:21804400-21810000 Weak transcription Spleen Spleen
7 chr12:21804600-21809600 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr12:21804600-21809800 Weak transcription Esophagus oesophagus
9 chr12:21804600-21809800 Weak transcription Gastric stomach
10 chr12:21806000-21810600 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
11 chr12:21806400-21809400 Weak transcription Aorta Aorta
12 chr12:21806400-21809600 Weak transcription Lung lung
13 chr12:21806400-21809600 Weak transcription Placenta Amnion Placenta Amnion
14 chr12:21807000-21809800 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
15 chr12:21807000-21810200 Transcr. at gene 5' and 3' A549 lung
16 chr12:21807200-21809400 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr12:21807400-21809400 Weak transcription Placenta Placenta
18 chr12:21807400-21809800 Weak transcription Colonic Mucosa Colon
19 chr12:21807600-21809400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
20 chr12:21807600-21809600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr12:21807600-21809800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr12:21807600-21811400 Active TSS GM12878-XiMat blood
23 chr12:21807800-21809600 Transcr. at gene 5' and 3' HUES64 Cell Line embryonic stem cell
24 chr12:21807800-21810200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
25 chr12:21808000-21809400 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
26 chr12:21808000-21809600 Transcr. at gene 5' and 3' HUES48 Cell Line embryonic stem cell
27 chr12:21808000-21809600 Weak transcription Pancreas Pancrea
28 chr12:21808000-21810200 Active TSS Right Atrium heart
29 chr12:21808200-21809400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr12:21808200-21809400 Weak transcription Breast Myoepithelial Primary Cells Breast
31 chr12:21808200-21809400 Weak transcription Fetal Muscle Trunk muscle
32 chr12:21808200-21809400 Transcr. at gene 5' and 3' NH-A brain
33 chr12:21808200-21809600 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
34 chr12:21808200-21809600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr12:21808200-21809800 Flanking Active TSS Primary T cells from cord blood blood
36 chr12:21808200-21810800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
37 chr12:21808200-21811000 Active TSS Primary T cells fromperipheralblood blood
38 chr12:21808200-21811200 Active TSS iPS-15b Cell Line embryonic stem cell
39 chr12:21808200-21811200 Active TSS K562 blood
40 chr12:21808400-21809400 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr12:21808400-21809400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
42 chr12:21808400-21809400 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr12:21808400-21809400 Flanking Active TSS Brain Angular Gyrus brain
44 chr12:21808400-21809400 Enhancers Skeletal Muscle Male skeletal muscle
45 chr12:21808400-21809600 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr12:21808400-21809600 Flanking Active TSS Cortex derived primary cultured neurospheres brain
47 chr12:21808400-21809600 Flanking Active TSS Osteobl bone
48 chr12:21808400-21809800 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
49 chr12:21808400-21810600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr12:21808400-21811200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015