Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs10889083	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1106366	0.83[EUR][1000 genomes]
rs1106367	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11207168	0.80[EUR][1000 genomes]
rs11207170	0.83[EUR][1000 genomes]
rs12058945	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12088082	0.89[EUR][1000 genomes]
rs1213764	0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1213770	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1213771	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1320555	0.87[ASN][1000 genomes]
rs1359494	0.80[EUR][1000 genomes]
rs17116867	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs17116869	0.83[EUR][1000 genomes]
rs1776184	0.83[EUR][1000 genomes]
rs4320799	0.86[EUR][1000 genomes]
rs58029039	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs58745009	0.83[EUR][1000 genomes]
rs59081310	0.91[AFR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72906581	0.88[EUR][1000 genomes]
rs7522031	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs821525	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs821526	0.87[ASN][1000 genomes]
rs821527	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs821528	0.87[ASN][1000 genomes]
rs821529	0.84[EUR][1000 genomes]
rs821530	0.84[EUR][1000 genomes]
rs872691	0.83[EUR][1000 genomes]
rs873989	0.83[EUR][1000 genomes]
rs946310	0.87[ASN][1000 genomes]
rs9782935	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1015057	chr1:57976993-58793962	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv530017	chr1:58002290-58669736	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	nsv431379	chr1:58224212-58802608	Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:58570000-58576000	Enhancers	GM12878-XiMat	blood

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