The 2.0 version of rSNPBase

Variant report

Variant rs74078712
Chromosome Location chr13:50491764-50491765
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:50476400-50497400 Weak transcription Pancreas Pancrea
2 chr13:50477800-50499600 Weak transcription Brain Inferior Temporal Lobe brain
3 chr13:50478000-50495200 Weak transcription Brain Hippocampus Middle brain
4 chr13:50479600-50508600 Weak transcription K562 blood
5 chr13:50479800-50500000 Weak transcription Colon Smooth Muscle Colon
6 chr13:50480800-50508800 Weak transcription Fetal Brain Male brain
7 chr13:50481800-50509600 Weak transcription Right Ventricle heart
8 chr13:50482600-50509600 Weak transcription Primary B cells from cord blood blood
9 chr13:50483000-50492200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr13:50484000-50509600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr13:50484200-50494000 Weak transcription HUES6 Cell Line embryonic stem cell
12 chr13:50484400-50493600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr13:50484400-50501800 Weak transcription HSMMtube muscle
14 chr13:50484400-50509400 Weak transcription Fetal Kidney kidney
15 chr13:50484600-50492200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr13:50484600-50493000 Weak transcription Placenta Amnion Placenta Amnion
17 chr13:50484600-50495200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr13:50484600-50509600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr13:50484800-50492200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr13:50485000-50492000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr13:50485000-50493000 Weak transcription Primary B cells from peripheral blood blood
22 chr13:50485000-50493400 Weak transcription Lung lung
23 chr13:50485000-50499400 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr13:50485200-50495200 Weak transcription Small Intestine intestine
25 chr13:50485800-50501800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr13:50485800-50506200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr13:50485800-50509200 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr13:50486000-50492800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr13:50486000-50496200 Strong transcription Skeletal Muscle Female skeletal muscle
30 chr13:50486000-50503400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr13:50486000-50503400 Strong transcription Liver Liver
32 chr13:50486000-50509400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr13:50486400-50495000 Weak transcription Fetal Brain Female brain
34 chr13:50486400-50495200 Weak transcription Brain Substantia Nigra brain
35 chr13:50486400-50509600 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr13:50486600-50508800 Weak transcription Hela-S3 cervix
37 chr13:50486800-50492000 Weak transcription Primary T cells fromperipheralblood blood
38 chr13:50487400-50509400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
39 chr13:50487600-50509400 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr13:50487800-50496800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
41 chr13:50488000-50492000 Weak transcription Fetal Intestine Small intestine
42 chr13:50488000-50492400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr13:50488000-50492800 Strong transcription HSMM muscle
44 chr13:50488000-50500400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr13:50488400-50509600 Weak transcription Colonic Mucosa Colon
46 chr13:50488600-50495200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr13:50488800-50495200 Weak transcription Psoas Muscle Psoas
48 chr13:50488800-50495200 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr13:50488800-50495200 Weak transcription GM12878-XiMat blood
50 chr13:50488800-50497800 Weak transcription A549 lung

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Last update: Aug 31, 2015