The 2.0 version of rSNPBase

Variant report

Variant rs74090333
Chromosome Location chr1:61694233-61694234
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:61680000-61720200 Weak transcription Fetal Muscle Trunk muscle
2 chr1:61682000-61706800 Weak transcription Gastric stomach
3 chr1:61690400-61696400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:61690600-61696400 Weak transcription Duodenum Mucosa Duodenum
5 chr1:61690600-61699000 Weak transcription Ovary ovary
6 chr1:61692200-61696400 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr1:61692600-61696000 Weak transcription A549 lung
8 chr1:61692600-61699400 Enhancers HepG2 liver
9 chr1:61692600-61703400 Weak transcription H9 Cell Line embryonic stem cell
10 chr1:61692800-61696000 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr1:61692800-61696000 Weak transcription Stomach Mucosa stomach
12 chr1:61692800-61696200 Weak transcription Right Ventricle heart
13 chr1:61692800-61696400 Weak transcription Esophagus oesophagus
14 chr1:61692800-61696400 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr1:61692800-61706800 Weak transcription Fetal Lung lung
16 chr1:61692800-61707000 Weak transcription Fetal Stomach stomach
17 chr1:61692800-61707200 Weak transcription Pancreas Pancrea
18 chr1:61693000-61694400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
19 chr1:61693000-61696000 Weak transcription Fetal Heart heart
20 chr1:61693000-61696200 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr1:61693000-61704000 Weak transcription Right Atrium heart
22 chr1:61693000-61706800 Weak transcription Brain Angular Gyrus brain
23 chr1:61693000-61706800 Weak transcription Fetal Muscle Leg muscle
24 chr1:61693200-61696000 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr1:61693200-61696200 Weak transcription Aorta Aorta
26 chr1:61693200-61696200 Weak transcription Colon Smooth Muscle Colon
27 chr1:61693200-61696200 Weak transcription K562 blood
28 chr1:61693400-61694400 Enhancers Liver Liver
29 chr1:61693800-61696000 Weak transcription Fetal Intestine Small intestine
30 chr1:61693800-61698200 Weak transcription Stomach Smooth Muscle stomach
31 chr1:61694000-61706800 Weak transcription Rectal Smooth Muscle rectum
32 chr1:61694200-61694600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr1:61694200-61696000 Weak transcription Breast Myoepithelial Primary Cells Breast
34 chr1:61694200-61696000 Weak transcription Brain Anterior Caudate brain
35 chr1:61694200-61696000 Weak transcription Brain Substantia Nigra brain
36 chr1:61694200-61696200 Weak transcription Fetal Brain Female brain
37 chr1:61694200-61696200 Weak transcription Left Ventricle heart
38 chr1:61694200-61696400 Weak transcription Psoas Muscle Psoas
39 chr1:61694200-61698600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:61694200-61699200 Weak transcription Brain Hippocampus Middle brain
41 chr1:61694200-61700200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr1:61694200-61700200 Weak transcription Brain Cingulate Gyrus brain
43 chr1:61694200-61703200 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr1:61694200-61703200 Weak transcription HMEC breast
45 chr1:61694200-61703400 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr1:61694200-61703600 Weak transcription Brain Germinal Matrix brain
47 chr1:61694200-61706800 Weak transcription Adipose Nuclei Adipose
48 chr1:61694200-61707000 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015