The 2.0 version of rSNPBase

Variant report

Variant rs74090325
Chromosome Location chr1:61685934-61685935
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:61669200-61692400 Weak transcription Fetal Muscle Leg muscle
2 chr1:61669400-61691800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr1:61669600-61686000 Weak transcription Brain Inferior Temporal Lobe brain
4 chr1:61669600-61692400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr1:61674200-61686200 Weak transcription Brain Cingulate Gyrus brain
6 chr1:61676600-61690000 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr1:61677600-61692400 Weak transcription Esophagus oesophagus
8 chr1:61679200-61692200 Weak transcription NHEK skin
9 chr1:61679800-61687400 Weak transcription Fetal Brain Male brain
10 chr1:61680000-61720200 Weak transcription Fetal Muscle Trunk muscle
11 chr1:61680800-61687400 Weak transcription A549 lung
12 chr1:61681800-61686000 Weak transcription Brain Substantia Nigra brain
13 chr1:61682000-61686200 Weak transcription Brain Anterior Caudate brain
14 chr1:61682000-61687400 Weak transcription Fetal Lung lung
15 chr1:61682000-61690200 Weak transcription Ovary ovary
16 chr1:61682000-61692400 Weak transcription Left Ventricle heart
17 chr1:61682000-61706800 Weak transcription Gastric stomach
18 chr1:61682200-61686000 Weak transcription HepG2 liver
19 chr1:61682200-61691800 Weak transcription Stomach Smooth Muscle stomach
20 chr1:61683600-61687200 Weak transcription Brain Hippocampus Middle brain
21 chr1:61683800-61686200 Weak transcription Rectal Smooth Muscle rectum
22 chr1:61683800-61692400 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr1:61684000-61687400 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr1:61684000-61690000 Weak transcription Adipose Nuclei Adipose
25 chr1:61684200-61686200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr1:61684200-61690200 Weak transcription Psoas Muscle Psoas
27 chr1:61684400-61692400 Weak transcription K562 blood
28 chr1:61685000-61687200 Weak transcription Liver Liver
29 chr1:61685000-61688600 Enhancers Cortex derived primary cultured neurospheres brain
30 chr1:61685600-61686200 Enhancers Fetal Stomach stomach
31 chr1:61685600-61687200 Enhancers Brain Germinal Matrix brain
32 chr1:61685600-61688200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
33 chr1:61685800-61686000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr1:61685800-61686000 Enhancers Colon Smooth Muscle Colon
35 chr1:61685800-61686400 Enhancers Brain Angular Gyrus brain
36 chr1:61685800-61686600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
37 chr1:61685800-61686600 Enhancers Fetal Brain Female brain
38 chr1:61685800-61686800 Enhancers Breast Myoepithelial Primary Cells Breast
39 chr1:61685800-61686800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr1:61685800-61687400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr1:61685800-61688200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015