Variant report

Variant	rs74090415
Chromosome Location	chr1:77714182-77714183
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs56099019	1.00[AMR][1000 genomes]
rs57002064	1.00[AMR][1000 genomes]
rs58413428	1.00[AMR][1000 genomes]
rs58537083	1.00[AMR][1000 genomes]
rs59621284	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59668564	0.92[AFR][1000 genomes]
rs60276611	1.00[AMR][1000 genomes]
rs60353910	1.00[AMR][1000 genomes]
rs6700151	1.00[AMR][1000 genomes]
rs74090412	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74090413	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74090434	1.00[AMR][1000 genomes]
rs74090455	1.00[AMR][1000 genomes]
rs74090458	1.00[AMR][1000 genomes]
rs74090463	1.00[AMR][1000 genomes]
rs74090465	1.00[AMR][1000 genomes]
rs74090474	1.00[AMR][1000 genomes]
rs74090475	1.00[AMR][1000 genomes]
rs74090476	1.00[AMR][1000 genomes]
rs74090479	1.00[AMR][1000 genomes]
rs74090490	1.00[AMR][1000 genomes]
rs74090495	1.00[AMR][1000 genomes]
rs74092424	1.00[AMR][1000 genomes]
rs74092439	1.00[AMR][1000 genomes]
rs74092446	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432398	chr1:77707391-77740836	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:77712000-77714200	Weak transcription	Brain Hippocampus Middle	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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