Variant report

Variant	rs74091235
Chromosome Location	chr14:106016115-106016116
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:61)
Chromatin interactive
region (count:0)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr14:106016106-106016156	GM12891	blood:	n/a
2	chr14:106016106-106016156	AG04450	lung:	fetal
3	chr14:106016106-106016156	U87	brain:	n/a
4	chr14:106016106-106016156	NB4	blood:	n/a
5	chr14:106016106-106016156	MCF-7	breast:	n/a
6	chr14:106016106-106016156	HNPCEpiC	eye:	n/a
7	chr14:106016106-106016156	HL-60	blood:	n/a
8	chr14:106016106-106016156	AoSMC	blood vessel:	n/a
9	chr14:106016106-106016156	SK-N-SH	brain:	n/a
10	chr14:106016106-106016156	AG09309	skin:	n/a
11	chr14:106016106-106016156	HAEpiC	amniotic membrane:	n/a
12	chr14:106016106-106016156	NH-A	brain:	n/a
13	chr14:106016106-106016156	HRPEpiC	eye:	n/a
14	chr14:106016106-106016156	AG04449	skin:	fetal
15	chr14:106016106-106016156	HPAEpiC	pulmonary alveolar:	n/a
16	chr14:106016106-106016156	HUVEC	blood vessel:	n/a
17	chr14:106016106-106016156	PrEC	prostate:	n/a
18	chr14:106016106-106016156	HCT-116	colon:	n/a
19	chr14:106016106-106016156	HRCEpiC	kidney:	n/a
20	chr14:106016106-106016156	GM06990	blood:	n/a
21	chr14:106016106-106016156	Caco-2	colon:	n/a
22	chr14:106016106-106016156	IMR90	lung:	fetal
23	chr14:106016106-106016156	PANC-1	pancreas:	n/a
24	chr14:106016106-106016156	NT2-D1	testis:	n/a
25	chr14:106016106-106016156	AG10803	skin:	n/a
26	chr14:106016106-106016156	ProgFib	skin:	n/a
27	chr14:106016106-106016156	MCF10A-Er-Src	breast:	n/a
28	chr14:106016106-106016156	H1-hESC	embryonic stem cell:	embryo
29	chr14:106016106-106016156	SK-N-MC	brain:	n/a
30	chr14:106016106-106016156	GM12878	blood:	n/a
31	chr14:106016106-106016156	BE2_C	brain:	n/a
32	chr14:106016106-106016156	HIPEpiC	eye:	n/a
33	chr14:106016106-106016156	GM12892	blood:	n/a
34	chr14:106016106-106016156	AG09319	gingival:	n/a
35	chr14:106016106-106016156	GM19239	blood:	n/a
36	chr14:106016106-106016156	BJ	skin:	n/a
37	chr14:106016106-106016156	HepG2	liver:	n/a
38	chr14:106016106-106016156	K562	blood:	n/a
39	chr14:106016106-106016156	SAEC	small airway:	n/a
40	chr14:106016106-106016156	SKMC	muscle:	n/a
41	chr14:106016106-106016156	CMK	blood:	n/a
42	chr14:106016106-106016156	RPTEC	kidney:	n/a
43	chr14:106016106-106016156	NHBE	bronchial:	n/a
44	chr14:106016106-106016156	ECC-1	luminal epithelium:	n/a
45	chr14:106016106-106016156	ovcar-3	ovarian:	n/a
46	chr14:106016106-106016156	HEEpiC	esophagus:	n/a
47	chr14:106016106-106016156	HCPEpiC	choroid plexus:	n/a
48	chr14:106016106-106016156	Hela-S3	cervix:	n/a
49	chr14:106016106-106016156	HRE	kidney:	n/a
50	chr14:106016106-106016156	SK-N-SH_RA	brain:	n/a

No data

Variant related genes	Relation type
ELK2BP	CpG island

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10138105	0.83[EUR][1000 genomes]
rs12232113	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28385363	0.83[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs28385498	0.83[EUR][1000 genomes]
rs28464276	0.99[ASN][1000 genomes]
rs28700121	0.83[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs28771143	0.95[ASN][1000 genomes]
rs28785039	0.99[ASN][1000 genomes]
rs28807390	0.98[ASN][1000 genomes]
rs28837201	1.00[ASN][1000 genomes]
rs28888427	0.99[ASN][1000 genomes]
rs34564731	0.87[ASN][1000 genomes]
rs35511437	0.87[ASN][1000 genomes]
rs7158619	0.96[ASN][1000 genomes]
rs72478887	0.98[ASN][1000 genomes]
rs73371879	0.91[ASN][1000 genomes]
rs73371887	0.90[ASN][1000 genomes]
rs73371895	0.91[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530813	chr14:105607701-106453697	Strong transcription Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	149 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:106014000-106016600	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell

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