Variant report

Variant	rs74103237
Chromosome Location	chr13:97960113-97960114
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr13:97954626..97957097-chr13:97959109..97962404,3	K562	blood:

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs55768634	1.00[AFR][1000 genomes]
rs74104398	1.00[AFR][1000 genomes]
rs74106909	1.00[AFR][1000 genomes]
rs74106916	1.00[AFR][1000 genomes]
rs74106920	1.00[AFR][1000 genomes]
rs74106933	1.00[AFR][1000 genomes]
rs74106936	0.82[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832694	chr13:97930561-98137882	ZNF genes & repeats Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:94 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:97914200-97960200	Weak transcription	Fetal Brain Male	brain
2	chr13:97925800-97987200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr13:97933200-97970400	Weak transcription	Placenta	Placenta
4	chr13:97942800-97995200	Weak transcription	Thymus	Thymus
5	chr13:97948600-97971600	Weak transcription	Rectal Mucosa Donor 29	rectum
6	chr13:97950000-97971200	Weak transcription	Stomach Mucosa	stomach
7	chr13:97950200-97961000	Weak transcription	K562	blood
8	chr13:97950200-97965200	Weak transcription	Monocytes-CD14+_RO01746	blood
9	chr13:97950800-97965200	Weak transcription	Primary hematopoietic stem cells	blood
10	chr13:97951200-97962600	Enhancers	Brain Hippocampus Middle	brain
11	chr13:97954400-97986200	Weak transcription	Primary T cells fromperipheralblood	blood
12	chr13:97955000-97960600	Weak transcription	Primary T cells from cord blood	blood
13	chr13:97955000-97964000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
14	chr13:97955000-97987000	Weak transcription	Primary T helper cells fromperipheralblood	blood
15	chr13:97955200-97965600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
16	chr13:97955200-97968200	Weak transcription	Placenta Amnion	Placenta Amnion
17	chr13:97955200-97970400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr13:97955200-97986800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
19	chr13:97955400-97971400	Weak transcription	Rectal Mucosa Donor 31	rectum
20	chr13:97955800-97961000	Weak transcription	Spleen	Spleen
21	chr13:97955800-97965800	Weak transcription	Lung	lung
22	chr13:97956400-97961600	Enhancers	Liver	Liver
23	chr13:97956800-97961000	Enhancers	Breast Myoepithelial Primary Cells	Breast
24	chr13:97957400-97960800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr13:97957600-97962400	Enhancers	Brain Angular Gyrus	brain
26	chr13:97957800-97960400	Enhancers	Brain Anterior Caudate	brain
27	chr13:97957800-97961400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
28	chr13:97957800-97961800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
29	chr13:97957800-97962400	Enhancers	Brain Inferior Temporal Lobe	brain
30	chr13:97958000-97962000	Enhancers	HUVEC	blood vessel
31	chr13:97958000-97962200	Enhancers	NHLF	lung
32	chr13:97958200-97961000	Enhancers	Rectal Smooth Muscle	rectum
33	chr13:97958200-97961200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
34	chr13:97958200-97961400	Enhancers	Fetal Heart	heart
35	chr13:97958200-97961800	Enhancers	Skeletal Muscle Male	skeletal muscle
36	chr13:97958200-97962000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
37	chr13:97958200-97962000	Enhancers	Fetal Muscle Leg	muscle
38	chr13:97958200-97962400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
39	chr13:97958200-97962400	Enhancers	Skeletal Muscle Female	skeletal muscle
40	chr13:97958400-97960200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
41	chr13:97958400-97960200	Enhancers	Brain Cingulate Gyrus	brain
42	chr13:97958400-97960200	Weak transcription	Fetal Muscle Trunk	muscle
43	chr13:97958400-97960200	Enhancers	HSMMtube	muscle
44	chr13:97958400-97961600	Enhancers	Muscle Satellite Cultured Cells	--
45	chr13:97958400-97961600	Enhancers	Adipose Nuclei	Adipose
46	chr13:97958400-97961600	Enhancers	Colon Smooth Muscle	Colon
47	chr13:97958400-97962600	Enhancers	Brain Substantia Nigra	brain
48	chr13:97958600-97960200	Enhancers	HSMM	muscle
49	chr13:97958600-97960200	Enhancers	Osteobl	bone
50	chr13:97958600-97960400	Weak transcription	Gastric	stomach

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