Variant report

Variant	rs74107278
Chromosome Location	chr13:93114073-93114074
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs3901971	1.00[EUR][1000 genomes]
rs3901972	1.00[EUR][1000 genomes]
rs3901973	1.00[EUR][1000 genomes]
rs4444192	1.00[EUR][1000 genomes]
rs59625209	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7336031	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74107281	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74107282	1.00[AMR][1000 genomes]
rs74107285	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9523722	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832680	chr13:93021114-93181489	Enhancers Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:93105800-93114800	Weak transcription	Fetal Brain Male	brain
2	chr13:93106200-93115400	Weak transcription	Ovary	ovary
3	chr13:93113600-93116000	Weak transcription	Pancreatic Islets	Pancreatic Islet
4	chr13:93113800-93114200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr13:93113800-93115800	Enhancers	Pancreas	Pancrea

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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