Variant report

Variant	rs74107814
Chromosome Location	chr13:95656868-95656869
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs11568662	1.00[AMR][1000 genomes]
rs74105420	1.00[AMR][1000 genomes]
rs74107809	1.00[AMR][1000 genomes]
rs74107818	1.00[AMR][1000 genomes]
rs74107819	1.00[AMR][1000 genomes]
rs9590144	1.00[AMR][1000 genomes]
rs9590156	1.00[AMR][1000 genomes]
rs9590161	1.00[AMR][1000 genomes]
rs9590163	1.00[AMR][1000 genomes]
rs9805226	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832688	chr13:95633193-95780198	Flanking Bivalent TSS/Enh Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:95655400-95657000	Enhancers	Esophagus	oesophagus
2	chr13:95655600-95657000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr13:95655600-95657000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr13:95655600-95657800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr13:95655600-95658400	Enhancers	Fetal Lung	lung
6	chr13:95655600-95722600	Weak transcription	Gastric	stomach
7	chr13:95655800-95657000	Enhancers	HUES48 Cell Line	embryonic stem cell
8	chr13:95655800-95657000	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
9	chr13:95655800-95659400	Weak transcription	Psoas Muscle	Psoas
10	chr13:95656200-95657000	Enhancers	Lung	lung
11	chr13:95656600-95657000	Enhancers	ES-I3 Cell Line	embryonic stem cell
12	chr13:95656600-95657000	Enhancers	H1 Cell Line	embryonic stem cell
13	chr13:95656600-95657000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr13:95656800-95657000	Enhancers	Cortex derived primary cultured neurospheres	brain
15	chr13:95656800-95657000	Enhancers	Spleen	Spleen

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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