Variant report

Variant	rs74118810
Chromosome Location	chr1:165539490-165539491
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:49)

rs_ID	r²[population]
rs1326375	0.81[AMR][1000 genomes]
rs1648111	0.81[AMR][1000 genomes]
rs166949	0.81[AMR][1000 genomes]
rs16846549	0.86[AMR][1000 genomes]
rs16846612	0.86[AMR][1000 genomes]
rs16846621	0.86[AMR][1000 genomes]
rs16847312	1.00[EUR][1000 genomes]
rs184038	0.81[AMR][1000 genomes]
rs184039	0.81[AMR][1000 genomes]
rs191746	0.81[AMR][1000 genomes]
rs192586	0.81[AMR][1000 genomes]
rs192587	0.81[AMR][1000 genomes]
rs2254880	0.81[AMR][1000 genomes]
rs2433131	0.81[AMR][1000 genomes]
rs2433132	0.81[AMR][1000 genomes]
rs2459240	0.81[AMR][1000 genomes]
rs2485399	0.81[AMR][1000 genomes]
rs2485400	0.81[AMR][1000 genomes]
rs2485401	0.81[AMR][1000 genomes]
rs2485408	0.81[AMR][1000 genomes]
rs285424	0.81[AMR][1000 genomes]
rs285433	0.81[AMR][1000 genomes]
rs285434	0.81[AMR][1000 genomes]
rs285436	0.81[AMR][1000 genomes]
rs285437	0.81[AMR][1000 genomes]
rs285442	0.81[AMR][1000 genomes]
rs285443	0.81[AMR][1000 genomes]
rs285445	0.81[AMR][1000 genomes]
rs285447	0.81[AMR][1000 genomes]
rs285449	0.81[AMR][1000 genomes]
rs285450	0.81[AMR][1000 genomes]
rs285451	0.81[AMR][1000 genomes]
rs285454	0.81[AMR][1000 genomes]
rs366124	0.81[AMR][1000 genomes]
rs369231	0.81[AMR][1000 genomes]
rs375780	0.81[AMR][1000 genomes]
rs385649	0.81[AMR][1000 genomes]
rs386186	0.81[AMR][1000 genomes]
rs390395	0.81[AMR][1000 genomes]
rs404612	0.81[AMR][1000 genomes]
rs415710	0.81[AMR][1000 genomes]
rs421361	0.81[AMR][1000 genomes]
rs424313	0.81[AMR][1000 genomes]
rs6426916	0.81[AMR][1000 genomes]
rs6659141	0.81[AMR][1000 genomes]
rs74118819	1.00[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74118822	1.00[EUR][1000 genomes]
rs74120729	0.86[AMR][1000 genomes]
rs796570	0.81[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429902	chr1:165531342-165574342	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:165539400-165539800	Enhancers	Fetal Muscle Leg	muscle

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links