Variant report

Variant	rs74124264
Chromosome Location	chr10:25968992-25968993
allele	A/C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs61273704	1.00[AMR][1000 genomes]
rs61411057	1.00[AMR][1000 genomes]
rs74124224	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74124225	1.00[AMR][1000 genomes]
rs74124240	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74124265	1.00[AMR][1000 genomes]
rs74124266	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1044482	chr10:25889919-25977270	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:25962800-25993600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr10:25968000-25970400	Enhancers	Cortex derived primary cultured neurospheres	brain
3	chr10:25968800-25969000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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