Variant report

Variant	rs74159197
Chromosome Location	chr10:119132295-119132296
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:119130955..119133218-chr10:119134123..119136577,2	K562	blood:

Variant related genes	Relation type
ENSG00000165650	Chromatin interaction

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11197959	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11197965	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11197966	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11197972	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12254737	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12263151	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2532812	0.81[AFR][1000 genomes]
rs363232	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74159176	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74159177	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74159178	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs74159179	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:119112600-119132800	Weak transcription	Gastric	stomach
2	chr10:119126800-119132800	Weak transcription	Lung	lung
3	chr10:119127400-119132800	Weak transcription	Fetal Thymus	thymus
4	chr10:119128600-119133000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr10:119128800-119133200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr10:119128800-119133200	Weak transcription	Placenta	Placenta
7	chr10:119129000-119132800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
8	chr10:119129200-119132600	Enhancers	Primary T regulatory cells fromperipheralblood	blood
9	chr10:119129200-119133200	Enhancers	Primary T killer naive cells fromperipheralblood	blood
10	chr10:119129600-119133400	Weak transcription	Placenta Amnion	Placenta Amnion
11	chr10:119129800-119132400	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
12	chr10:119130000-119132600	Enhancers	Primary monocytes fromperipheralblood	blood
13	chr10:119130000-119132800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
14	chr10:119130200-119132800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
15	chr10:119130200-119132800	Weak transcription	Fetal Muscle Trunk	muscle
16	chr10:119130200-119135600	Active TSS	Fetal Intestine Large	intestine
17	chr10:119130400-119132600	Active TSS	Primary B cells from cord blood	blood
18	chr10:119130400-119132800	Enhancers	Primary T killer memory cells from peripheral blood	blood
19	chr10:119130400-119132800	Enhancers	Fetal Lung	lung
20	chr10:119130600-119133400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr10:119130800-119132600	Enhancers	Skeletal Muscle Female	skeletal muscle
22	chr10:119131000-119132400	Enhancers	ES-I3 Cell Line	embryonic stem cell
23	chr10:119131000-119132600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr10:119131000-119133200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
25	chr10:119131200-119132800	Weak transcription	Esophagus	oesophagus
26	chr10:119131200-119133400	Active TSS	Colonic Mucosa	Colon
27	chr10:119131200-119133400	Weak transcription	Spleen	Spleen
28	chr10:119131200-119135600	Active TSS	K562	blood
29	chr10:119131400-119132400	Enhancers	Primary T cells from cord blood	blood
30	chr10:119131400-119132400	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
31	chr10:119131400-119132400	Flanking Active TSS	Duodenum Mucosa	Duodenum
32	chr10:119131400-119132600	Enhancers	Primary T helper naive cells from peripheral blood	blood
33	chr10:119131400-119132600	Flanking Active TSS	Hela-S3	cervix
34	chr10:119131400-119132800	Flanking Active TSS	Muscle Satellite Cultured Cells	--
35	chr10:119131400-119132800	Enhancers	Skeletal Muscle Male	skeletal muscle
36	chr10:119131400-119133000	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
37	chr10:119131400-119133000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
38	chr10:119131400-119133200	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
39	chr10:119131400-119135400	Active TSS	Pancreas	Pancrea
40	chr10:119131400-119135800	Active TSS	Fetal Intestine Small	intestine
41	chr10:119131400-119135800	Active TSS	NHLF	lung
42	chr10:119131600-119132400	Flanking Active TSS	Brain Cingulate Gyrus	brain
43	chr10:119131600-119132600	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
44	chr10:119131600-119132800	Weak transcription	Primary T cells fromperipheralblood	blood
45	chr10:119131600-119132800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
46	chr10:119131600-119132800	Weak transcription	Left Ventricle	heart
47	chr10:119131600-119133000	Flanking Active TSS	HUVEC	blood vessel
48	chr10:119131600-119133000	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
49	chr10:119131600-119133200	Enhancers	Brain Substantia Nigra	brain
50	chr10:119131600-119133800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin

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