The 2.0 version of rSNPBase

Variant report

Variant rs7428966
Chromosome Location chr3:133887977-133887978
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:133863000-133902200 Weak transcription GM12878-XiMat blood
2 chr3:133864200-133899800 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr3:133864600-133892400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr3:133866200-133898600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr3:133871800-133919200 Weak transcription K562 blood
6 chr3:133873400-133891400 Weak transcription Fetal Brain Female brain
7 chr3:133873400-133907400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr3:133873600-133890400 Weak transcription Esophagus oesophagus
9 chr3:133873800-133892200 Weak transcription Primary T helper naive cells from peripheral blood blood
10 chr3:133874400-133929400 Weak transcription Placenta Amnion Placenta Amnion
11 chr3:133874600-133892200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr3:133874600-133933600 Weak transcription Colonic Mucosa Colon
13 chr3:133877600-133907400 Weak transcription Colon Smooth Muscle Colon
14 chr3:133877600-133935200 Weak transcription Psoas Muscle Psoas
15 chr3:133877800-133894200 Weak transcription Brain Inferior Temporal Lobe brain
16 chr3:133877800-133894400 Weak transcription Brain Cingulate Gyrus brain
17 chr3:133877800-133894600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
18 chr3:133877800-133920200 Weak transcription Brain Substantia Nigra brain
19 chr3:133877800-133950200 Weak transcription Small Intestine intestine
20 chr3:133878000-133893000 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr3:133878000-133894400 Weak transcription NHDF-Ad bronchial
22 chr3:133878200-133891600 Weak transcription Brain Anterior Caudate brain
23 chr3:133878200-133892400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr3:133878200-133892400 Weak transcription HSMMtube muscle
25 chr3:133878200-133893400 Weak transcription Brain Hippocampus Middle brain
26 chr3:133878200-133901600 Weak transcription Fetal Brain Male brain
27 chr3:133878400-133891600 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr3:133878400-133892200 Weak transcription Rectal Smooth Muscle rectum
29 chr3:133878400-133893000 Weak transcription Hela-S3 cervix
30 chr3:133878400-133894400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr3:133878400-133907400 Weak transcription Brain Angular Gyrus brain
32 chr3:133878600-133892400 Weak transcription Cortex derived primary cultured neurospheres brain
33 chr3:133878600-133893800 Weak transcription Right Ventricle heart
34 chr3:133879000-133889200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr3:133879000-133889200 Weak transcription Pancreas Pancrea
36 chr3:133879000-133890400 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr3:133879000-133891600 Weak transcription Lung lung
38 chr3:133879000-133891600 Weak transcription Thymus Thymus
39 chr3:133879000-133891600 Weak transcription Spleen Spleen
40 chr3:133879000-133892400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr3:133879000-133892800 Weak transcription Aorta Aorta
42 chr3:133879000-133894400 Weak transcription H9 Cell Line embryonic stem cell
43 chr3:133879000-133894600 Weak transcription Gastric stomach
44 chr3:133879200-133891600 Weak transcription HepG2 liver
45 chr3:133880000-133892400 Weak transcription NHLF lung
46 chr3:133881800-133908800 Weak transcription iPS-15b Cell Line embryonic stem cell
47 chr3:133882400-133897400 Weak transcription Fetal Kidney kidney
48 chr3:133884600-133889000 Weak transcription NH-A brain
49 chr3:133884600-133900000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
50 chr3:133885000-133893600 Weak transcription Brain Germinal Matrix brain

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Last update: Aug 31, 2015