Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs12107625	0.82[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12107635	0.84[EUR][1000 genomes]
rs12485344	0.81[EUR][1000 genomes]
rs12497559	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs16863121	0.81[EUR][1000 genomes]
rs1876746	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs3796242	0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4434182	0.85[EUR][1000 genomes]
rs61104836	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs62282747	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs62282751	0.85[EUR][1000 genomes]
rs62282752	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs62282753	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs62284766	0.81[EUR][1000 genomes]
rs744669	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7617623	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7625786	0.84[EUR][1000 genomes]
rs7625985	0.80[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7647641	0.84[EUR][1000 genomes]
rs7647988	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv915879	chr3:150607390-150860207	Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:150677800-150679800	Enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr3:150678400-150679200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
3	chr3:150678600-150679200	Enhancers	iPS-15b Cell Line	embryonic stem cell
4	chr3:150678600-150679200	Enhancers	Fetal Muscle Trunk	muscle
5	chr3:150678600-150679400	Enhancers	Fetal Muscle Leg	muscle
6	chr3:150678600-150680000	Enhancers	GM12878-XiMat	blood
7	chr3:150678800-150679200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
8	chr3:150678800-150679400	Enhancers	HUES48 Cell Line	embryonic stem cell
9	chr3:150679000-150679600	Enhancers	ES-I3 Cell Line	embryonic stem cell

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