Variant report

Variant	rs4434182
Chromosome Location	chr3:150682229-150682230
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs12107625	0.85[EUR][1000 genomes]
rs12107635	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12485344	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12497559	0.82[EUR][1000 genomes]
rs16863118	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs16863121	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1876746	0.85[EUR][1000 genomes]
rs358972	0.93[ASN][1000 genomes]
rs3796242	0.82[EUR][1000 genomes]
rs55920295	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs55990585	0.87[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs61104836	0.82[EUR][1000 genomes]
rs62282743	0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62282747	0.82[AFR][1000 genomes];0.81[EUR][1000 genomes]
rs62282751	0.98[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62282752	0.84[EUR][1000 genomes]
rs62282753	0.85[EUR][1000 genomes]
rs62284766	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs62284768	0.89[ASN][1000 genomes]
rs744669	0.85[EUR][1000 genomes]
rs744670	0.85[EUR][1000 genomes]
rs7617623	0.83[EUR][1000 genomes]
rs7625786	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7625985	0.85[EUR][1000 genomes]
rs7647641	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7647988	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv915879	chr3:150607390-150860207	Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:150679200-150683400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
2	chr3:150682000-150682600	Enhancers	Primary neutrophils fromperipheralblood	blood

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