Variant report

Variant	rs74688685
Chromosome Location	chr4:118249209-118249210
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1000847	chr4:118186059-118285838	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv1004858	chr4:118248984-118382051	Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers	TF binding region Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:118246000-118250600	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr4:118246200-118250400	Active TSS	HMEC	breast
3	chr4:118246400-118249600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr4:118247000-118249600	Active TSS	HSMMtube	muscle
5	chr4:118247600-118250000	Active TSS	NH-A	brain
6	chr4:118248600-118249600	Active TSS	Brain Anterior Caudate	brain
7	chr4:118248600-118249800	Active TSS	Brain Substantia Nigra	brain
8	chr4:118248800-118249400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr4:118249200-118249400	Flanking Active TSS	Brain Angular Gyrus	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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